DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and AT5G10900

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001331691.1 Gene:AT5G10900 / 830957 AraportID:AT5G10900 Length:627 Species:Arabidopsis thaliana


Alignment Length:471 Identity:124/471 - (26%)
Similarity:197/471 - (41%) Gaps:94/471 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 LKGYYRRAAAHMSL----GKFKQALCDFEFVAKCRPNDKDAKLKF-----------TECNKIVKM 166
            ||...||.|....|    ....:.||.   |.|...::.|..||.           .|..::.:|
plant    45 LKEISRRGADRDFLKDPENSVTRILCS---VLKQVVSNSDRSLKSLRGFQYETLDDQEKQQVTRM 106

  Fly   167 RAFERAIAVDKPEKTLSEMYSDM-ENITIE--------DDYKGPQLE------DGKVTLKFMKEL 216
            .|..:.:...|.|....:...|| |.|.:|        .|:....||      :.::||::::.|
plant   107 IASVQGMGSRKYEPETVDHLEDMTEPIEMEIYLGNGDGGDFGDIVLEPISWPLESQLTLEWVETL 171

  Fly   217 ME--HYKAQKR--------LHRKFAYKILCEIDTYMRAQPSLVDIT-VPDEEKFTICGDIHGQFY 270
            |.  :....|.        |....|..::......:..:.:.|.|. ..::.:..:.||:|||.:
plant   172 MGLLNQSTWKNSVSEFSLILPHSVAVSLVDCASQILEKEANCVKINGCSEDSRVIVVGDLHGQLH 236

  Fly   271 DLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFLARGNHESINMNQMY 335
            ||:.||:.:|.||:...::|||:::.|||:|:|....|..:|::.|.:..|.||:.|:....:..
plant   237 DLLKIFDQSGRPSQNQCFVFNGNYIGRGSWSLEVFLVLLAWKIMMPENVILLRGSSETRVSAEEL 301

  Fly   336 GFTGEVTAKYTSAMADIFTQ---VFNWLPLCHCINQKILVMHGGLFSTEDV-------------- 383
            .|..::..:|......::::   .|..|||...|:..:...|||||.:..|              
plant   302 DFLKDICDRYGEHGPMLYSKCIDCFKMLPLASVISNSVYTTHGGLFQSCGVHEESPNPSLLLGSL 366

  Fly   384 -TLDHIRRIERNCQPPEEGLMCELLWSDPQQWMGLGQSKRGV-GIQFGPDVTEKFCKDNNLDYII 446
             .||.|.|.:......|...:..:|||.|  ||..|.|:... |:.:|.|.||.|.:.:||..||
plant   367 EELDKIERRQAGENDDENITLNHVLWSCP--WMADGLSESNYKGLLWGADCTETFLQQSNLKMII 429

  Fly   447 RSHEVKD------------MGYEVAH---NGKCITVFSAP-------NYCDTMGNMGAFITITGN 489
            ||||..|            .||.:.|   :||..|||||.       ||    .|.||:..:...
plant   430 RSHEGPDARADREDMGNMLSGYSIDHEVESGKLCTVFSASMFSQGSRNY----ENEGAYAVLEPP 490

  Fly   490 NL-KPNYKSF--EAVP 502
            |. :|.:.|:  |.||
plant   491 NFTEPVFVSYTVENVP 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 100/366 (27%)
PP2Ac 226..502 CDD:197547 91/320 (28%)
AT5G10900NP_001331691.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45668
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

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