DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and Ppp5c

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_006228527.2 Gene:Ppp5c / 65179 RGDID:68415 Length:594 Species:Rattus norvegicus


Alignment Length:592 Identity:305/592 - (51%)
Similarity:384/592 - (64%) Gaps:103/592 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ASVEITGSKQPEEDTNARTKAELDFAAAEQYKNQGNEMLKTKEFSKAIDMYTKAIELHPNSAIYY 86
            |..|.|...:|..|   ...||.....||:.|.|.|:..|.|::..||..|::||||:|::||||
  Rat     4 AEGERTECAEPPRD---EPPAEGTLKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYY 65

  Fly    87 ANRSLAHLRQESFGFALQDGVSAVKADPAYLKGYYRRAAAHMSLGKFKQALCDFEFVAKCRPNDK 151
            .|||||:||.|.:|:||.|...|::.|..|:||||||||::|:||||:.||.|:|.|.|.:||||
  Rat    66 GNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPNDK 130

  Fly   152 DAKLKFTECNKIVKMRAFERAIAVDKPEKTLSEMYSDMENITIEDDYKGPQLEDGKVTLKFMKEL 216
            |||:|:.||:||||.:|||||||.|:..:::.:.. |:|::||||:|.||:|||||||:.|||:|
  Rat   131 DAKMKYQECSKIVKQKAFERAIAGDEHRRSVVDSL-DIESMTIEDEYSGPKLEDGKVTITFMKDL 194

  Fly   217 MEHYKAQKRLHRKFAYKI-------LCEIDTYMR------------------------------- 243
            |:.||.||:||||.||:|       ||::.|.:.                               
  Rat   195 MQWYKDQKKLHRKCAYQILVQVKEVLCKLSTLVETTLKEVRLGLWVQGGGVIKAGQAVGRSPSSR 259

  Fly   244 -----AQPSLVDITVPD------------------------------------------------ 255
                 ..|||  ::|||                                                
  Rat   260 LRNPPVHPSL--LSVPDTPPTCLPSSLLCPLPLCLAWIFLVCCDLSPLIPLCPLPTSLSGPLPLR 322

  Fly   256 ------EEKFTICGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTLFGFKLL 314
                  .||.|:|||.|||||||:||||:||||||.|||:||||||||||||||.|.||||||||
  Rat   323 WPLFFQTEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLL 387

  Fly   315 YPNHFFLARGNHESINMNQMYGFTGEVTAKYTSAMADIFTQVFNWLPLCHCINQKILVMHGGLFS 379
            ||:||.|.|||||:.||||:|||.|||.||||:.|.::|::||.||||..|||.|:|:|||||||
  Rat   388 YPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFS 452

  Fly   380 TEDVTLDHIRRIERNCQPPEEGLMCELLWSDPQQWMGLGQSKRGVGIQFGPDVTEKFCKDNNLDY 444
            .:.||||.||:||||.|||:.|.||:|||||||...|...|||||..|||||||:.|.::|.|||
  Rat   453 EDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSVSKRGVSCQFGPDVTKAFLEENQLDY 517

  Fly   445 IIRSHEVKDMGYEVAHNGKCITVFSAPNYCDTMGNMGAFITITGNNLKPNYKSFEAVPHPDVKPM 509
            ||||||||..||||||.|:|:||||||||||.|||..::|.:.|::|:|.:..|.|||||:||||
  Rat   518 IIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKPM 582

  Fly   510 AYANSLM 516
            ||||:|:
  Rat   583 AYANTLL 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150 32/64 (50%)
TPR_1 49..81 CDD:278916 14/31 (45%)
TPR repeat 49..77 CDD:276809 11/27 (41%)
TPR repeat 82..112 CDD:276809 17/29 (59%)
MPP_PP5_C 198..513 CDD:277362 214/411 (52%)
PP2Ac 226..502 CDD:197547 185/372 (50%)
Ppp5cXP_006228527.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337261
Domainoid 1 1.000 304 1.000 Domainoid score I1327
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4550
Inparanoid 1 1.050 627 1.000 Inparanoid score I816
OMA 1 1.010 - - QHG54071
OrthoDB 1 1.010 - - D215218at33208
OrthoFinder 1 1.000 - - FOG0005066
OrthoInspector 1 1.000 - - oto98031
orthoMCL 1 0.900 - - OOG6_102598
Panther 1 1.100 - - LDO PTHR45668
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3586
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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