DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and ppp2caa

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001017886.1 Gene:ppp2caa / 550585 ZFINID:ZDB-GENE-050417-441 Length:309 Species:Danio rerio


Alignment Length:300 Identity:120/300 - (40%)
Similarity:171/300 - (56%) Gaps:10/300 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 DGKVTLKFMKELMEHYKAQKRLHRKFAYKILCE-IDTYMRAQPSLVDITVPDEEKFTICGDIHGQ 268
            |.||..|.:.:.:|.....|:|... ..||||| ....:..:.::.::..|    .|:|||:|||
Zfish     2 DEKVFTKELDQWIEQLNECKQLSEN-QVKILCEKAKEILSKESNVQEVRCP----VTVCGDVHGQ 61

  Fly   269 FYDLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFLARGNHESINMNQ 333
            |:|||.:|:|.|...:.| |||.||:||||.:|||.:..|...|:.|.....:.||||||..:.|
Zfish    62 FHDLMELFKIGGKSPDTN-YLFMGDYVDRGYYSVETVTLLVSLKVRYRERITILRGNHESRQITQ 125

  Fly   334 MYGFTGEVTAKYTSA-MADIFTQVFNWLPLCHCINQKILVMHGGLFSTEDVTLDHIRRIERNCQP 397
            :|||..|...||.:| :...||.:|::|||...::.:|..:||||..:.| ||||||.::|..:.
Zfish   126 VYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDTQIFCLHGGLSPSID-TLDHIRALDRIQEV 189

  Fly   398 PEEGLMCELLWSDPQQWMGLGQSKRGVGIQFGPDVTEKFCKDNNLDYIIRSHEVKDMGYEVAHNG 462
            |.||.||:||||||....|.|.|.||.|..||.|::|.|...|.|..:.|:|::...||...|..
Zfish   190 PHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANCLTLVSRAHQLVMEGYNWCHER 254

  Fly   463 KCITVFSAPNYCDTMGNMGAFITITGNNLKPNYKSFEAVP 502
            ..:|:|||||||...||..|.:.: .:.||.::..|:..|
Zfish   255 NVVTIFSAPNYCYRCGNQAAIMEL-DDTLKYSFLQFDPAP 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 119/299 (40%)
PP2Ac 226..502 CDD:197547 113/277 (41%)
ppp2caaNP_001017886.1 MPP_PP2A_PP4_PP6 9..293 CDD:277360 115/291 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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