DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and Pp4-19C

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001285489.1 Gene:Pp4-19C / 45031 FlyBaseID:FBgn0023177 Length:307 Species:Drosophila melanogaster


Alignment Length:331 Identity:134/331 - (40%)
Similarity:179/331 - (54%) Gaps:37/331 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 YSDMENITIEDDYKGPQLEDGKVTLKFMKELMEHYKAQKRLHRKFAYKILCEIDTYMRAQPSLVD 250
            |||::.          |:|..| ..:.:||     ...|.|..| |.:||.|.....|     ||
  Fly     4 YSDLDR----------QIEQLK-RCEIIKE-----NEVKALCAK-AREILVEEGNVQR-----VD 46

  Fly   251 ITVPDEEKFTICGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTLFGFKLLY 315
            ..|      |:|||||||||||..:|::.|...||| |||.|||||||.:|||....|...|:.|
  Fly    47 SPV------TVCGDIHGQFYDLKELFKVGGDVPEKN-YLFMGDFVDRGYYSVETFLLLLALKVRY 104

  Fly   316 PNHFFLARGNHESINMNQMYGFTGEVTAKY-TSAMADIFTQVFNWLPLCHCINQKILVMHGGLFS 379
            |:...|.||||||..:.|:|||..|...|| ::|:....|::|::|.|...|:.||..:|||| |
  Fly   105 PDRITLIRGNHESRQITQVYGFYDECLRKYGSTAVWRYCTEIFDYLSLSAIIDGKIFCVHGGL-S 168

  Fly   380 TEDVTLDHIRRIERNCQPPEEGLMCELLWSDPQQWMGLGQSKRGVGIQFGPDVTEKFCKDNNLDY 444
            .....||.||.|:|..:.|.:|.||:||||||:...|.|.|.||.|..||.||..:|.:.|::|.
  Fly   169 PSIQYLDQIRSIDRKQEVPHDGPMCDLLWSDPEDQTGWGVSPRGAGYLFGSDVVSQFNRTNDIDM 233

  Fly   445 IIRSHEVKDMGYEVAHNGKCITVFSAPNYCDTMGNMGAFITITGNNLKPNYKSFEAVPH-----P 504
            |.|:|::...|::...|...:||:||||||...||:.|.:.: ...|..::..|||.|.     |
  Fly   234 ICRAHQLVMEGFKWHFNETVLTVWSAPNYCYRCGNVAAILEL-NEYLHRDFVIFEAAPQESRGIP 297

  Fly   505 DVKPMA 510
            ..||.|
  Fly   298 SKKPQA 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 131/319 (41%)
PP2Ac 226..502 CDD:197547 120/276 (43%)
Pp4-19CNP_001285489.1 MPP_PP2A_PP4_PP6 6..290 CDD:277360 127/314 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438821
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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