DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and flw

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_727418.1 Gene:flw / 44289 FlyBaseID:FBgn0000711 Length:461 Species:Drosophila melanogaster


Alignment Length:363 Identity:135/363 - (37%)
Similarity:194/363 - (53%) Gaps:30/363 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 KMRAFERAIAVDKPEKTLSEMYSDMENITIEDDYKGPQLEDGKVTLK----FMKELMEHYKAQKR 225
            :.|...:..::..|.:|:  :.:|.:.||:..    |:.|..|..||    |:.|.:...:..|:
  Fly    99 QQRRLLQQYSISPPSETM--ISADGDQITVHH----PREEPKKSRLKLRDFFVAEFVRSCRTGKQ 157

  Fly   226 LHRKFA-YKILC----EIDTYMRAQPSLVDITVPDEEKFTICGDIHGQFYDLMNIFEINGLPSEK 285
            :....| .:.||    ||   ...||.|:::..|    ..||||||||:.||:.:||..|.|...
  Fly   158 VQMTEAEVRGLCLKSREI---FLQQPILLELEAP----LIICGDIHGQYTDLLRLFEYGGFPPAA 215

  Fly   286 NPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFLARGNHESINMNQMYGFTGEVTAKYTSAMA 350
            | |||.||:||||..|:|.|..|..:|:.||.:|||.|||||..::|::|||..|...:|...:.
  Fly   216 N-YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNVKLW 279

  Fly   351 DIFTQVFNWLPLCHCINQKILVMHGGLFSTEDVTLDHIRRIERNCQPPEEGLMCELLWSDP-QQW 414
            ..||..||.||:...|::||...|||| |.:...::.|||:.|....|:.||:|:|||||| :..
  Fly   280 KTFTDCFNCLPVAAIIDEKIFCCHGGL-SPDLQGMEQIRRLMRPTDVPDTGLLCDLLWSDPDKDV 343

  Fly   415 MGLGQSKRGVGIQFGPDVTEKFCKDNNLDYIIRSHEVKDMGYEVAHNGKCITVFSAPNYCDTMGN 479
            .|.|::.|||...||.||..||...:.||.|.|:|:|.:.|||.....:.:|:|||||||....|
  Fly   344 QGWGENDRGVSFTFGVDVVSKFLNRHELDLICRAHQVVEDGYEFFARRQLVTLFSAPNYCGEFDN 408

  Fly   480 MGAFITITGNNLKPNYKSFEAVPHPDVKPMAYANSLMN 517
            .|..:|:....:    .||: :..|..|...|..|.||
  Fly   409 AGGMMTVDDTLM----CSFQ-ILKPSEKKAKYLYSGMN 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 126/324 (39%)
PP2Ac 226..502 CDD:197547 115/281 (41%)
flwNP_727418.1 MPP_PP1_PPKL 149..428 CDD:277359 116/292 (40%)
PP2Ac 160..430 CDD:197547 116/283 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438825
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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