DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and gsp-2

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001022616.1 Gene:gsp-2 / 3564807 WormBaseID:WBGene00001748 Length:333 Species:Caenorhabditis elegans


Alignment Length:269 Identity:115/269 - (42%)
Similarity:164/269 - (60%) Gaps:11/269 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 AQPSLVDITVPDEEKFTICGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTL 308
            :||.|:::..|    ..||||:|||:|||:.:||..|.|.|.| |||.||:||||..|:|.|..|
 Worm    47 SQPILLELEAP----LKICGDVHGQYYDLLRLFEYGGFPPESN-YLFLGDYVDRGKQSLETICLL 106

  Fly   309 FGFKLLYPNHFFLARGNHESINMNQMYGFTGEVTAKYTSAMADIFTQVFNWLPLCHCINQKILVM 373
            ..:|:.||.:|||.|||||..::|::|||..|...:|...:...||..||.||:...|::||...
 Worm   107 LAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEKIFCC 171

  Fly   374 HGGLFSTEDVTLDHIRRIERNCQPPEEGLMCELLWSDPQQWM-GLGQSKRGVGIQFGPDVTEKFC 437
            |||| |.:..:::.||||.|....|::||:|:||||||.:.: |.|::.|||...|||:|..||.
 Worm   172 HGGL-SPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVTGWGENDRGVSFTFGPEVVAKFL 235

  Fly   438 KDNNLDYIIRSHEVKDMGYEVAHNGKCITVFSAPNYCDTMGNMGAFITITGNNLKPNYKSFEAVP 502
            ..::||.|.|:|:|.:.|||.....:.:|:|||||||....|.|:.:|:....:    .||:.:.
 Worm   236 HKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGSMMTVDETLM----CSFQILK 296

  Fly   503 HPDVKPMAY 511
            ..|.|...|
 Worm   297 PADKKKYPY 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 115/269 (43%)
PP2Ac 226..502 CDD:197547 112/258 (43%)
gsp-2NP_001022616.1 PTZ00480 5..315 CDD:185658 115/269 (43%)
MPP_PP1_PPKL 7..297 CDD:277359 112/259 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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