DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and ppp1cab

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_997875.1 Gene:ppp1cab / 327301 ZFINID:ZDB-GENE-030131-5512 Length:332 Species:Danio rerio


Alignment Length:272 Identity:111/272 - (40%)
Similarity:166/272 - (61%) Gaps:11/272 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 AQPSLVDITVPDEEKFTICGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTL 308
            :||.|:::..|    ..||||:|||:|||:.:||..|.|.|.| |||.||:||||..|:|.|..|
Zfish    48 SQPILLELEAP----LKICGDVHGQYYDLLRLFEYGGYPPESN-YLFLGDYVDRGKQSLETICLL 107

  Fly   309 FGFKLLYPNHFFLARGNHESINMNQMYGFTGEVTAKYTSAMADIFTQVFNWLPLCHCINQKILVM 373
            ..:|:.||.:|||.|||||..::|::|||..|...:|...:...||..||.||:...:::||...
Zfish   108 LAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCC 172

  Fly   374 HGGLFSTEDVTLDHIRRIERNCQPPEEGLMCELLWSDP-QQWMGLGQSKRGVGIQFGPDVTEKFC 437
            |||| |.:..:::.|||:.|....|::||:|:|||:|| :..||.|::.|||...||.||..||.
Zfish   173 HGGL-SPDLQSMEQIRRVMRPTDVPDQGLLCDLLWADPDKDVMGWGENDRGVSFTFGSDVVAKFL 236

  Fly   438 KDNNLDYIIRSHEVKDMGYEVAHNGKCITVFSAPNYCDTMGNMGAFITITGNNLKPNYKSFEAVP 502
            ..:::|.|.|:|:|.:.|||.....:.:|:|||||||....|.||.:::....:    .||:.:.
Zfish   237 HKHDMDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLM----CSFQILK 297

  Fly   503 HPDVKPMAYANS 514
            ..:.|.::|..:
Zfish   298 PAEKKVLSYGGA 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 111/269 (41%)
PP2Ac 226..502 CDD:197547 109/258 (42%)
ppp1cabNP_997875.1 PTZ00480 6..321 CDD:185658 111/272 (41%)
MPP_PP1_PPKL 8..298 CDD:277359 109/259 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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