DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and ppb1

DIOPT Version :10

Sequence 1:NP_524946.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_596178.1 Gene:ppb1 / 2540024 PomBaseID:SPBP4H10.04 Length:554 Species:Schizosaccharomyces pombe


Alignment Length:315 Identity:119/315 - (37%)
Similarity:172/315 - (54%) Gaps:25/315 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 EDGKVTLKFMKELMEHYKAQKRLHRKFAYKILCEIDTYMRAQPSLVDITVPDEEKFTICGDIHGQ 268
            |..|..|.|::   .|:..:.||..:....|:.:....::::.:|:::..|    .|:|||||||
pombe    66 EPDKPDLHFLR---NHFIREGRLSEEQTLYIIKKATEILKSEDNLIEVDAP----VTVCGDIHGQ 123

  Fly   269 FYDLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFLARGNHESINMNQ 333
            :||||.:||:.|.|: ...|||.||:||||.||:||:..|:..|:.||...:|.|||||..::..
pombe   124 YYDLMKLFEVGGNPA-NTQYLFLGDYVDRGYFSIECLLYLWALKIWYPKTLWLLRGNHECAHLTD 187

  Fly   334 MYGFTGEVTAKYTSAMADIFTQVFNWLPLCHCINQKILVMHGGLFSTEDVTLDHIRRIERNCQPP 398
            .:.|..|.|.||...:.:...|.||.|||...:|::.|.:|||| |.|..||:.||.|.|.|:||
pombe   188 YFTFKLECTHKYNIKVYEACLQSFNALPLAAIMNKQFLCVHGGL-SPELHTLNDIRMINRFCEPP 251

  Fly   399 EEGLMCELLWSDPQQWMGLGQSK--------RGVGIQFGPDVTEKFCKDNNLDYIIRSHEVKDMG 455
            ..||||:||||||.:..|..:|.        ||....:.......|.::|||..:||:||.:|:|
pombe   252 THGLMCDLLWSDPLEDFGSEKSNKHFIHNNVRGCSYFYSYQAVCTFLENNNLLSVIRAHEAQDVG 316

  Fly   456 YEVAHNGK------CITVFSAPNYCDTMGNMGAFITITGNNLKPNYKSFEAVPHP 504
            |.:....|      .:|:||||||.|...|..|.:....|.:  |.:.|...|||
pombe   317 YRMYRKTKTTGFPSLMTIFSAPNYLDVYNNKAAVLKYENNVM--NIRQFNCSPHP 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_524946.1 3a0801s09 7..>140 CDD:273380
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 119/315 (38%)
ppb1NP_596178.1 MPP_PP2B 70..374 CDD:277361 117/311 (38%)
Blue background indicates that the domain is not in the aligned region.

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