DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and ZK938.1

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_496117.1 Gene:ZK938.1 / 191467 WormBaseID:WBGene00014158 Length:327 Species:Caenorhabditis elegans


Alignment Length:267 Identity:107/267 - (40%)
Similarity:152/267 - (56%) Gaps:13/267 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 ILCEIDTYMRAQPSLVDITVPDEEKFTICGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFVDRG 298
            ::.|....:.||.::|::..|    ..:|||||||:.||:.||.....|.::| |||.||:||||
 Worm    34 VIEECKDILSAQATMVEVQAP----IAVCGDIHGQYTDLLRIFNRCSFPPDQN-YLFLGDYVDRG 93

  Fly   299 SFSVECIFTLFGFKLLYPNHFFLARGNHESINMNQMYGFTGEVTAKYTSAMADIFTQVFNWLPLC 363
            ...:|.|..|..:|:.|||.||:.|||||..::|:.|||..|...:|:.|:.:.|..:||.||||
 Worm    94 RQQLEVICLLMAYKVRYPNGFFILRGNHECASINRTYGFYDECKRRYSLALYNEFQNLFNSLPLC 158

  Fly   364 HCINQKILVMHGGLFSTEDVTLDHIRRIERNCQPPEEGLMCELLWSDPQ-QWMGLGQSKRGVGIQ 427
            ..|:.:|..||||| |.|.|:...:.:|.|...||...|..:|||:||: ...|.|::.|||...
 Worm   159 AMISGRIFCMHGGL-SPELVSWTQLAKIIRPFDPPNACLAMDLLWADPENNHTGWGKNSRGVSYI 222

  Fly   428 FGPDVTEKFCKDNNLDYIIRSHEVKDMGYEVAHNGKCITVFSAPNYCDTM-GNMGAFIT-----I 486
            ||.:|.:.|.:..|:|.|.|.|:|...|||...:.:.:|:||||.||... .|.|..|.     |
 Worm   223 FGANVVKDFTEKMNIDLIARGHQVVQDGYEFFADKRLVTIFSAPKYCGEFDNNAGIMIVDERLII 287

  Fly   487 TGNNLKP 493
            :...|||
 Worm   288 SFEILKP 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 107/267 (40%)
PP2Ac 226..502 CDD:197547 107/267 (40%)
ZK938.1NP_496117.1 MPP_superfamily 3..294 CDD:301300 105/265 (40%)
PP2Ac 28..296 CDD:197547 107/267 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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