DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and Ppp3cb

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_006518770.1 Gene:Ppp3cb / 19056 MGIID:107163 Length:534 Species:Mus musculus


Alignment Length:358 Identity:126/358 - (35%)
Similarity:188/358 - (52%) Gaps:46/358 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 NKIVKMRAFERAIAVDKPEKTLSEMYSDMENITIEDDYKGPQLEDGKVTLKFMKELMEHYKAQKR 225
            :::||      |:......:..||...||:.|...|..|...:::|                  |
Mouse    24 DRVVK------AVPFPPTHRLTSEEVFDMDGIPRVDVLKNHLVKEG------------------R 64

  Fly   226 LHRKFAYKILCEIDTYMRAQPSLVDITVPDEEKFTICGDIHGQFYDLMNIFEINGLPSEKNPYLF 290
            :..:.|.:|:.|....:|.:.:::::..|    .|:||||||||:|||.:||:.|.|:... |||
Mouse    65 VDEEIALRIINEGAAILRREKTMIEVEAP----ITVCGDIHGQFFDLMKLFEVGGSPANTR-YLF 124

  Fly   291 NGDFVDRGSFSVECIFTLFGFKLLYPNHFFLARGNHESINMNQMYGFTGEVTAKYTSAMADIFTQ 355
            .||:||||.||:||:..|:..|:|||:..||.|||||..::.:.:.|..|...||:..:.:...:
Mouse   125 LGDYVDRGYFSIECVLYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACME 189

  Fly   356 VFNWLPLCHCINQKILVMHGGLFSTEDVTLDHIRRIERNCQPPEEGLMCELLWSDPQQWMGLGQS 420
            .|:.|||...:||:.|.:|||| |.|..|||.|||::|..:||..|.||:||||||.:..|..:|
Mouse   190 AFDSLPLAALLNQQFLCVHGGL-SPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKS 253

  Fly   421 K--------RGVGIQFGPDVTEKFCKDNNLDYIIRSHEVKDMGYEVAHNGK------CITVFSAP 471
            :        ||....:......:|.::|||..|||:||.:|.||.:....:      .||:||||
Mouse   254 QEHFSHNTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAP 318

  Fly   472 NYCDTMGNMGAFITITGNNLKPNYKSFEAVPHP 504
            ||.|...|..|.:....|.:  |.:.|...|||
Mouse   319 NYLDVYNNKAAVLKYENNVM--NIRQFNCSPHP 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 117/321 (36%)
PP2Ac 226..502 CDD:197547 111/289 (38%)
Ppp3cbXP_006518770.1 MPP_PP2B 50..354 CDD:277361 118/326 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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