DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and Y69E1A.4

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_502041.1 Gene:Y69E1A.4 / 190550 WormBaseID:WBGene00013476 Length:375 Species:Caenorhabditis elegans


Alignment Length:364 Identity:109/364 - (29%)
Similarity:159/364 - (43%) Gaps:85/364 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 MENITIEDDYKGPQLEDGKVTLKFMKELMEHYKAQKRLHRKFAYKILCEID---------TYMRA 244
            ||.|..||.         |....|:.:::|  |...:...|.:..:.|..:         ..:.:
 Worm     1 MEKINTEDQ---------KNVRNFVNKILE--KIVFKWTHKTSMDLFCAAELAELCHRARELIWS 54

  Fly   245 QPSLVDITVPDEEKFTIC--GDIHGQFYDLMNIFEINGLP------------------SEKNP-- 287
            :|..:.:..|      ||  |||||||.||:.:.::||.|                  :.|.|  
 Worm    55 EPIFLKLEAP------ICVMGDIHGQFDDLLAMLDMNGWPLSSQEFEALKDTTVRSRETGKRPQS 113

  Fly   288 ---------------------------------YLFNGDFVDRGSFSVECIFTLFGFKLLYPNHF 319
                                             |||.||:||||.||:|.:..|...||.||:..
 Worm   114 EPHSTQPESSNDVKPPVAAPKSVNKEVTTGYKRYLFLGDYVDRGPFSMEVVILLTALKLAYPDRI 178

  Fly   320 FLARGNHESINMNQMYGFTGEVTAKYTSAMADIFTQVFNWLPLCHCINQKILVMHGGLFSTEDVT 384
            :|.||||||.::|..|||..||..:|.:.:.:.|..:||..|.|..||..|:.||||:  :|.:|
 Worm   179 YLLRGNHESRSVNTSYGFYREVNYRYDAQLYECFQNMFNVFPFCAVINNTIMCMHGGI--SEHLT 241

  Fly   385 -LDHIRRIERNCQPPEEGLMCELLWSDPQQW-MGLGQSKRGVGIQFGPDVTEKFCKDNNLDYIIR 447
             .:.....:|..:.|:.|::.:|.|:||... .|...|.||....|||.....|.|..:|..:||
 Worm   242 SFNQFSVFKRPLEIPDVGVLTDLTWADPDPTEKGYKPSARGASFVFGPPALRAFLKKLDLQMVIR 306

  Fly   448 SHEVKDMGYEVAHNGKCITVFSAPNYCDTMGNMGAFITI 486
            .|:|.:.|||.....:.:|:|||||||....|..|..:|
 Worm   307 GHQVVEDGYEFFDGRRLVTIFSAPNYCGQNDNTAAVFSI 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 104/355 (29%)
PP2Ac 226..502 CDD:197547 100/327 (31%)
Y69E1A.4NP_502041.1 PP2Ac 36..360 CDD:197547 99/318 (31%)
MPP_superfamily 39..358 CDD:301300 98/315 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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