DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and Ppef2

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_030110066.1 Gene:Ppef2 / 19023 MGIID:1342304 Length:797 Species:Mus musculus


Alignment Length:553 Identity:145/553 - (26%)
Similarity:221/553 - (39%) Gaps:174/553 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 FALQDGVSAVKADPAYLKGYYRRAAAHMSLGKFKQALCDFEFVAKCRPNDKDAKLKFTE------ 159
            ||.|:...|.|| .|.::.:|||..|.:.:    :..|.:..........:..::|..|      
Mouse    51 FAFQNAEKAFKA-AALIQRWYRRYMARLEM----RRRCTWNIFQSIEYAGQQDQVKLHEFFSYLV 110

  Fly   160 -------------CNKIVKMRAFERAIAVDKPEKTLSEMYSDMENITIEDDYKGPQLEDGKVTLK 211
                         .|::.....|.:.:.        :|...|.|:|.:.|.|.||:|     :..
Mouse   111 DHFTPSSHHERDFLNRMFTEERFAQDVE--------TEEGGDFESIEVPDSYTGPRL-----SFP 162

  Fly   212 FMKE----LMEHYKAQKRLHRKFAYKILCEIDTYMRAQPSLVDITVPDEEKFTICGDIHGQFYDL 272
            .:.:    |:|.::.:::||.::...:|.|...::...|::..::....|:.|:|||:|||..||
Mouse   163 LLPDHATALVEAFRLRQQLHARYVLNLLYETRKHLAQLPNINRVSTCYSEEVTVCGDLHGQLDDL 227

  Fly   273 MNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFLARGNHESINMNQMYGF 337
            :.||..|||||.:..|:|||||||||..|||.:..||.|.|:||..|.|.|||||...:|..|||
Mouse   228 IFIFYKNGLPSPERAYVFNGDFVDRGKDSVEVLMVLFAFMLVYPKEFHLNRGNHEDHLVNLRYGF 292

  Fly   338 TGEVTAKYT---SAMADIFTQVFNWLPLCHCINQKILVMHGGLFSTEDVTLDHIRRIERN----- 394
            |.||..||.   ..:......||.||||...:::|:||:|||:....|:.|  :.:::|:     
Mouse   293 TKEVMHKYKIHGKKILRTLQDVFCWLPLATLVDEKVLVLHGGVSDKTDLEL--LAKLDRHKIVST 355

  Fly   395 --CQPPEE-----------------------------------------------GLMC------ 404
              |:..:|                                               |..|      
Mouse   356 MRCKTRKESENREEQKRKDNQTSSGQKPTPWFLPQSRSLPSSPFHLGSGFKAYKAGRSCSIPCGS 420

  Fly   405 ----------------------------------------------------------------- 404
                                                                             
Mouse   421 PNSKELSRRGQVRRSVDLELEQCRQQAGFLGIREKGESLPLAPDADCVADGGGVLEPTPEEWKQV 485

  Fly   405 -ELLWSDPQQWMGL-GQSKRGVGIQFGPDVTEKFCKDNNLDYIIRSHEVKDMGYEVAHNGKCITV 467
             ::|||||....|. ..:.||.|..|||||||:..:...|..:|||||.|..|||..||.|.:|:
Mouse   486 VDILWSDPAAQEGCKANAVRGGGCYFGPDVTERLMEKYKLQLLIRSHECKPEGYEFCHNRKVLTI 550

  Fly   468 FSAPNYCDTMGNMGAFITITGNNLKPNYKSFEA 500
            |||.||.:...|.||::.: |..|.|:...::|
Mouse   551 FSASNYYEVGSNRGAYVKL-GPALTPHIVQYQA 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150 6/12 (50%)
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809 4/10 (40%)
MPP_PP5_C 198..513 CDD:277362 124/437 (28%)
PP2Ac 226..502 CDD:197547 118/405 (29%)
Ppef2XP_030110066.1 IQ 61..80 CDD:197470 7/23 (30%)
MPP_RdgC 162..581 CDD:277364 119/421 (28%)
FRQ1 621..765 CDD:227455
EFh 701..766 CDD:238008
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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