DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and F20D6.6

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_505103.2 Gene:F20D6.6 / 184725 WormBaseID:WBGene00017636 Length:316 Species:Caenorhabditis elegans


Alignment Length:337 Identity:76/337 - (22%)
Similarity:144/337 - (42%) Gaps:62/337 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 EDGKVTLKFMKELMEHYKAQKRLHRKFAYKILCEIDTYMRAQPSLVD-------ITVPDEEKFTI 261
            ::|.....|.:|:::.:..:..:..::::..|.|:   :.....::|       ||.|    ..|
 Worm     6 QNGGNERNFYEEIIQIHLQKGPVEHEYSFGFLSEL---LEDALEIMDGTSRVEYITPP----VNI 63

  Fly   262 CGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFLARG-- 324
            ||||..::.|:::||:..|.|.|:. |:|.|:.:|.|.||:|.:..|...|:.||.:|.:.||  
 Worm    64 CGDIRSRYGDVLDIFKTCGWPFEQK-YVFLGNLIDGGKFSLETLVILLCCKICYPQNFVILRGFY 127

  Fly   325 NHESINMNQMYGFTGEVTAKYT-----SAMADIFTQVFNWLPLCHCINQKILVMHGGLFSTEDVT 384
            .||.:..::  .|.||:..::.     .|:..|...:...||:...:|:|:|.::|       :.
 Worm   128 EHELVKSDR--SFIGELRVRFPDSNKWQALNAIIKSLLKRLPVMTVLNRKLLCVNG-------MV 183

  Fly   385 LDHIRRIERNCQPPEEGLMCELLWSDPQQWMGLGQSKRGVGIQF------GP----------DVT 433
            ..:|:. |:|....:.|.|.|             .....|.:||      .|          .:.
 Worm   184 TSNIKN-EKNVVSVKNGNMFE-------------NHNTRVEVQFLDIDIPSPVTPNKIDEESKII 234

  Fly   434 EKFCKDNNLDYIIRSHEVKDMGYEVAHNGKCITVFSAPNYCDTMGNMGAFITITGNNLKPNYKSF 498
            ::..|..::..:|.|:.|...||......:.||:.|.........|.|..:.:..:| |.|:||.
 Worm   235 KELLKSMDMSMMINSNNVVREGYRFTLKNQLITITSGTKLQKNYNNRGVVMMMDRHN-KVNFKSI 298

  Fly   499 EAVPHPDVKPMA 510
            :.:...|...:|
 Worm   299 QGIDGEDRTDLA 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 76/337 (23%)
PP2Ac 226..502 CDD:197547 71/305 (23%)
F20D6.6NP_505103.2 MPP_superfamily 39..285 CDD:387346 65/276 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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