DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and C24H11.2

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_499528.1 Gene:C24H11.2 / 182860 WormBaseID:WBGene00007700 Length:384 Species:Caenorhabditis elegans


Alignment Length:383 Identity:128/383 - (33%)
Similarity:182/383 - (47%) Gaps:64/383 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 AVDKPEKTLSEMYSDMENITI-EDDYKGPQLEDG-KVTLK--FMKELMEHYKAQKRLH------- 227
            |.|.|:||..|..|:..|..| |.|.||.:|.|. |..||  |.|.:|..   :|.:|       
 Worm    13 ATDAPKKTSVEPGSEANNWHITEADEKGFKLTDMIKKLLKPVFSKAIMFD---EKEIHVLLTRVF 74

  Fly   228 --------RKFAYKILCEIDTYMR----AQPSLVDITVPDEEKFTICGDIHGQFYDLMNIFEING 280
                    :|.|........|.|.    |..:|:::..|    ..||||.|||:.||:.||...|
 Worm    75 KYYTSPPNKKTAPSASASATTSMSPPKPAANALLELQAP----INICGDTHGQYNDLLRIFNACG 135

  Fly   281 LPSEKNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFLARGNHESINMNQMYGFTGEVTAKY 345
             .:.|..|||.||:||||..|:|.|..||..||..|....|.|||||...:|:.|||..|:..::
 Worm   136 -AATKTQYLFLGDYVDRGGHSLEVIMLLFSLKLAMPRKMHLLRGNHELKAINKNYGFHAELKKRF 199

  Fly   346 T-----SAMADIFTQVFNWLPLCHCINQKILVMHGGLFSTEDVTLDHIRRIERNCQPPE-EGLMC 404
            .     .::.:.|.|||:::|||..::::||.||||: |....:||.||.|....:..: ..|.|
 Worm   200 QREEVYESVYNHFNQVFSYMPLCAIVSKRILCMHGGI-SPHLKSLDDIRAIPLPLETAKTHPLAC 263

  Fly   405 ELLWSDPQQ-WMGLGQSK-RGVGIQFGPDVTEKFCKDNNLDYIIRSHEVKDMGYEVAHNGKCITV 467
            :|||:||:: ..|...:| |.:...||....:..||..::|.|:|:|:|.:.||....:.:.|||
 Worm   264 DLLWADPEKDAKGFEPNKIRAISNVFGKKEVDDLCKRLDIDLIVRAHQVVEYGYAFFADRRLITV 328

  Fly   468 FSAPNYCDTMGNMGAFITITGN------NLKPNYKSFEA----------------VPH 503
            |||..|...:.|..|.:.:...      .|||  :.||.                |||
 Worm   329 FSASRYQIELCNYAAVVVVNKMLELSFVQLKP--EDFEVRRDECEENAKDQTTSNVPH 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 117/358 (33%)
PP2Ac 226..502 CDD:197547 103/324 (32%)
C24H11.2NP_499528.1 MPP_superfamily 43..360 CDD:301300 108/325 (33%)
PP2Ac 106..360 CDD:197547 93/259 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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