DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and pph-1

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001369937.1 Gene:pph-1 / 182242 WormBaseID:WBGene00004083 Length:349 Species:Caenorhabditis elegans


Alignment Length:248 Identity:109/248 - (43%)
Similarity:149/248 - (60%) Gaps:7/248 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 QPSLVDITVPDEEKFTICGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTLF 309
            ||.|:::..|    ..|.|||||||.||:.:|.:.|.|.|.| |||.||:||||..|:|.|..|.
 Worm    54 QPMLLELEPP----LKIGGDIHGQFADLLRLFNLAGYPPESN-YLFLGDYVDRGPKSIETIVLLL 113

  Fly   310 GFKLLYPNHFFLARGNHESINMNQMYGFTGEVTAKYTSAMADIFTQVFNWLPLCHCINQKILVMH 374
            .:|:.|||:|||.|||||..|:|::|||..|...:|:..:...|..|||.:|:...|:.||...|
 Worm   114 CYKIKYPNNFFLLRGNHEVANLNRIYGFYDECKRRYSVKLWKCFQDVFNCMPVAALIDNKIFCCH 178

  Fly   375 GGLFSTEDVTLDHIRRIERNCQPPEEGLMCELLWSDPQQW-MGLGQSKRGVGIQFGPDVTEKFCK 438
            ||| |....:||.::|:.|.|...|.||:|::|||||... :|...::|||...||.||..:|.:
 Worm   179 GGL-SPNLRSLDQLKRLSRPCDVQETGLLCDVLWSDPDATVVGWAPNERGVSYVFGVDVLAQFLQ 242

  Fly   439 DNNLDYIIRSHEVKDMGYEVAHNGKCITVFSAPNYCDTMGNMGAFITITGNNL 491
            ..:||.::|.|:|.:.|||.......:|||||||||....|.||.:.:..|.|
 Worm   243 KMDLDIVVRGHQVVEDGYEFFGRRGLVTVFSAPNYCGEFDNAGAVMNVDENLL 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 109/248 (44%)
PP2Ac 226..502 CDD:197547 109/248 (44%)
pph-1NP_001369937.1 MPP_superfamily 15..303 CDD:417454 109/248 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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