DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and gsp-1

DIOPT Version :10

Sequence 1:NP_524946.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001256250.1 Gene:gsp-1 / 179486 WormBaseID:WBGene00001747 Length:329 Species:Caenorhabditis elegans


Alignment Length:260 Identity:112/260 - (43%)
Similarity:159/260 - (61%) Gaps:13/260 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 AQPSLVDITVPDEEKFTICGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTL 308
            :||.|:::..|    ..||||||||:.||:.:||..|.|.|.| |||.||:||||..|:|.|..|
 Worm    48 SQPILLELEAP----LKICGDIHGQYNDLLRLFEYGGFPPEAN-YLFLGDYVDRGKQSLETICLL 107

  Fly   309 FGFKLLYPNHFFLARGNHESINMNQMYGFTGEVTAKYTSAMADIFTQVFNWLPLCHCINQKILVM 373
            ..:|:.||.:|||.|||||..::|::|||..|...:::..:...||..||.||:...|::||...
 Worm   108 LAYKVKYPENFFLLRGNHECASINRIYGFYDECKRRFSIKLWKTFTDCFNCLPIAALIDEKIFCC 172

  Fly   374 HGGLFSTEDVTLDHIRRIERNCQPPEEGLMCELLWSDPQQWM-GLGQSKRGVGIQFGPDVTEKFC 437
            |||| |.:...::.|||:.|....|:.||:|:||||||.:.: |.|::.|||...|||||..||.
 Worm   173 HGGL-SPDLQNMEQIRRVMRPTDVPDTGLLCDLLWSDPDKDVTGWGENDRGVSFTFGPDVVAKFL 236

  Fly   438 KDNNLDYIIRSHEVKDMGYEVAHNGKCITVFSAPNYCDTMGNMGAFITI------TGNNLKPNYK 496
            ..::||.|.|:|:|.:.|||.....:.:|:|||||||....|.|..:::      :...|||:.|
 Worm   237 NRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEK 301

  Fly   497  496
             Worm   302  301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_524946.1 3a0801s09 7..>140 CDD:273380
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 112/260 (43%)
gsp-1NP_001256250.1 MPP_PP1_PPKL 8..298 CDD:277359 109/255 (43%)
Blue background indicates that the domain is not in the aligned region.

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