DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PpD3 and let-92

DIOPT Version :10

Sequence 1:NP_524946.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001369970.1 Gene:let-92 / 178117 WormBaseID:WBGene00002363 Length:318 Species:Caenorhabditis elegans


Alignment Length:272 Identity:114/272 - (41%)
Similarity:161/272 - (59%) Gaps:9/272 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 KILCE-IDTYMRAQPSLVDITVPDEEKFTICGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFVD 296
            |.||| ....:..:|::.::..|    .|:|||:||||:|||.:|::.|...:.| |||.||:||
 Worm    38 KTLCEKAKEILEKEPNVQEVRCP----VTVCGDVHGQFHDLMELFKMGGKSPDTN-YLFMGDYVD 97

  Fly   297 RGSFSVECIFTLFGFKLLYPNHFFLARGNHESINMNQMYGFTGEVTAKY-TSAMADIFTQVFNWL 360
            ||.:|||.:..|...|:.|.:...|.||||||..:.|:|||..|...|| .|.:...||.:|:..
 Worm    98 RGYYSVETVSLLVCLKIRYKDRVTLLRGNHESRQITQVYGFYDECLRKYGNSNVWKYFTDLFDCF 162

  Fly   361 PLCHCINQKILVMHGGLFSTEDVTLDHIRRIERNCQPPEEGLMCELLWSDPQQWMGLGQSKRGVG 425
            ||...::.:|..:||||..:.| ||||||.::|..:.|.||.||:||||||....|.|.|.||.|
 Worm   163 PLTALVDGQIFCLHGGLSPSID-TLDHIRALDRIQEVPHEGPMCDLLWSDPDDRGGWGISPRGAG 226

  Fly   426 IQFGPDVTEKFCKDNNLDYIIRSHEVKDMGYEVAHNGKCITVFSAPNYCDTMGNMGAFITITGNN 490
            ..||.|::|.|...|.|..|.|:|::...||..:|:...:|||||||||...||..|.:.: .::
 Worm   227 YTFGQDISETFNHSNGLTLISRAHQLVMEGYNWSHDRNVVTVFSAPNYCYRCGNQAAMVEL-DDD 290

  Fly   491 LKPNYKSFEAVP 502
            ||.::..|:..|
 Worm   291 LKYSFLQFDPAP 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_524946.1 3a0801s09 7..>140 CDD:273380
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 114/272 (42%)
let-92NP_001369970.1 MPP_PP2A_PP4_PP6 18..302 CDD:277360 113/270 (42%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.