DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PpD3 and ZC477.2

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_501111.2 Gene:ZC477.2 / 177485 WormBaseID:WBGene00022617 Length:374 Species:Caenorhabditis elegans


Alignment Length:343 Identity:94/343 - (27%)
Similarity:157/343 - (45%) Gaps:60/343 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 KFMKELMEHYKAQKRLHRKFAYK---ILCE--IDTYMRAQPSLVDITVPDEEKFTICGDIHGQFY 270
            :|:|::::..:..||.....:..   .:|.  ||.:.:.| :|::::.|    .|:.||:||.|:
 Worm    33 EFLKKMIQPGRVMKRSKNNLSSNEVWSVCRAVIDEFKKEQ-NLMEVSAP----VTVIGDVHGNFH 92

  Fly   271 DLMNI----------------FEINGLPSEKNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHF 319
            ||...                |.......:|  |:|.|:::|:|..|:|||..||.||:.:|..:
 Worm    93 DLYRALLARTEQDITDEQKSNFSTRQFVRDK--YVFLGNYIDKGPRSIECICLLFAFKICFPQKY 155

  Fly   320 FLARGNHE--SINMNQMYGFTGEVTAKYTSAMADIFTQVFNWLPLCHCINQKILVMHGG----LF 378
            .|.||.||  |:|.::..|.....:..:...:...|.:.|:|:||...:.||||.:|||    |.
 Worm   156 ILLRGPHECPSVNSSEFLGVMETFSPNHFKKIHKKFNEAFSWMPLAAVVGQKILCVHGGISPRLT 220

  Fly   379 STEDVTLDHIRRIERNCQ-PPEEGLMCELLWSDPQQW--MGLGQSK--------RGVGIQFGPDV 432
            |.||     ||:|:|..: ..|:.|..:||::|...:  :.:...|        |.:.:.:....
 Worm   221 SWED-----IRKIKRPLKDATEDPLATDLLFADTLDFDLIHIPTRKPKYEFNVIRNMSVMYNEAA 280

  Fly   433 TEKFCKDNNLDYIIRSHEVKDMGYEVAHNGKCITVFSAPNYCDTMGNMGAFITITGN------NL 491
            ..:||:..||..|||||.....||......:.||:|::..: ....|.||.:.|.||      :|
 Worm   281 VTQFCEKFNLKLIIRSHMKVPFGYRFFSEKRLITIFNSTGF-QNESNYGAVLKIDGNAKITIISL 344

  Fly   492 KPNYKSFEA---VPHPDV 506
            .|.....|.   ..|.|:
 Worm   345 LPQQSKAEVQEKAHHSDM 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 94/343 (27%)
PP2Ac 226..502 CDD:197547 88/322 (27%)
ZC477.2NP_501111.2 PP2Ac 52..348 CDD:197547 87/308 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.