DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and R13A5.11

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001299879.1 Gene:R13A5.11 / 176075 WormBaseID:WBGene00020053 Length:459 Species:Caenorhabditis elegans


Alignment Length:363 Identity:124/363 - (34%)
Similarity:181/363 - (49%) Gaps:32/363 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 VAKCRPNDKDAKLKFTECNK--IVKMRAFERAIAVDKPEKTLSEMYSDMENITIEDDYKGPQLED 205
            :||.:| .....:..||.||  .:..:..|...||:...:...:|..:.|.  .:....||::..
 Worm    73 MAKTQP-PSGRTISLTEINKPNALSKKNTEIKAAVEIQNRLTKKMAKNSER--RKQMAHGPEMTA 134

  Fly   206 GKVT---LKFMKELMEHYKA-QKRLHRKFAY------KILCEIDTYMRAQPSLVDITVPDEEKFT 260
            ...|   :.|:..|..||:. |..:| |..|      .::.|..|...::.:||||..|    ..
 Worm   135 QNRTQERIDFVDFLDRHYQVIQAGVH-KIQYTKEEFENVIYEAQTIFSSEKALVDIDPP----CV 194

  Fly   261 ICGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTLFGFKLLYPNHFFLARGN 325
            :.||:||||.||:|:|.:.|.|.| ..|:|.||:||||..|:|||..||.:|:.||.:..|.|||
 Worm   195 VVGDLHGQFNDLINMFILLGRPPE-TVYVFTGDYVDRGMMSLECIMLLFTYKICYPENIVLLRGN 258

  Fly   326 HESINMNQMYGFTGEVTAKYTSAMADI---FTQVFNWLPLCHCINQKILVMHGGLFSTEDVTLDH 387
            ||...:|:.|||..|..........:|   |.:.||.||:...|..|||.||||| |.....||.
 Worm   259 HEIARVNKKYGFYEECVTSIPKCGEEIWALFQRCFNNLPISALIATKILCMHGGL-SPALTCLDE 322

  Fly   388 IRRIERNCQPPEEGLMCELLWSDPQ----QWMGLGQSKRGVGIQFGPDVTEKFCKDNNLDYIIRS 448
            :|...:..:.|..|::.::||:||.    :|..   |.||.|..||.:|.:..||...::.|||:
 Worm   323 LRNHPKPIRNPFRGIVNDMLWADPDPSVFEWKA---SSRGSGFTFGTNVIDDVCKRLGVELIIRA 384

  Fly   449 HEVKDMGYEVAHNGKCITVFSAPNYCDTMGNMGAFITI 486
            |::...||.|....|.||:||||.||:...|.|..:.:
 Worm   385 HQMCFDGYWVLSGRKLITIFSAPMYCNFYKNAGCVLKV 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 112/306 (37%)
PP2Ac 226..502 CDD:197547 104/274 (38%)
R13A5.11NP_001299879.1 PP2Ac 164..437 CDD:197547 102/268 (38%)
MPP_PPP_family 194..422 CDD:277316 94/232 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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