DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and F52H3.6

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_496167.1 Gene:F52H3.6 / 174561 WormBaseID:WBGene00009948 Length:329 Species:Caenorhabditis elegans


Alignment Length:244 Identity:102/244 - (41%)
Similarity:143/244 - (58%) Gaps:7/244 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   244 AQPSLVDITVPDEEKFTICGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTL 308
            ||.::|::..|    ..:|||||||:.||:.||.....|.::| |||.||:||||...:|.|..|
 Worm    44 AQATMVEVQAP----IAVCGDIHGQYTDLLRIFNRCSFPPDQN-YLFLGDYVDRGRQQLEVICLL 103

  Fly   309 FGFKLLYPNHFFLARGNHESINMNQMYGFTGEVTAKYTSAMADIFTQVFNWLPLCHCINQKILVM 373
            ..:|:.|||.||:.|||||..::|:.|||..|...:|:.|:.:.|..:||.||||..|:.:|..|
 Worm   104 MAYKIRYPNRFFILRGNHECASINRTYGFYDECKRRYSLALYNDFQNLFNHLPLCAMISGRIFCM 168

  Fly   374 HGGLFSTEDVTLDHIRRIERNCQPPEEGLMCELLWSDPQQWM-GLGQSKRGVGIQFGPDVTEKFC 437
            |||| |.:.|:...:..|.|...||...|..:|||:||:..| |..:|.|||...||.||.:.|.
 Worm   169 HGGL-SQKLVSWTQLAEITRPFDPPNNSLAMDLLWADPENNMTGWAESSRGVSQIFGADVVKDFT 232

  Fly   438 KDNNLDYIIRSHEVKDMGYEVAHNGKCITVFSAPNYCDTMGNMGAFITI 486
            :..|:|.|.|.|:|...|||...:.:.:|:||||.||....|..|.:.:
 Worm   233 EKMNIDLIARGHQVVQDGYEFFADKRLVTIFSAPKYCGEFDNNAAVMIV 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 102/244 (42%)
PP2Ac 226..502 CDD:197547 102/244 (42%)
F52H3.6NP_496167.1 MPP_superfamily 3..294 CDD:301300 102/244 (42%)
PP2Ac 26..295 CDD:197547 102/244 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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