DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and Ppp4c

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_599186.1 Gene:Ppp4c / 171366 RGDID:621225 Length:307 Species:Rattus norvegicus


Alignment Length:286 Identity:123/286 - (43%)
Similarity:161/286 - (56%) Gaps:20/286 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 AYKILCEIDTYMRAQPSLVDITVPDEEKFTICGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFV 295
            |.:||.|.....|     ||..|      |:|||||||||||..:|.:.|...|.| |||.||||
  Rat    32 AREILVEESNVQR-----VDSPV------TVCGDIHGQFYDLKELFRVGGDVPETN-YLFMGDFV 84

  Fly   296 DRGSFSVECIFTLFGFKLLYPNHFFLARGNHESINMNQMYGFTGEVTAKYTSAMADIF-TQVFNW 359
            |||.:|||....|...|:.||:...|.||||||..:.|:|||..|...||.|.....: |::|::
  Rat    85 DRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDY 149

  Fly   360 LPLCHCINQKILVMHGGLFSTEDVTLDHIRRIERNCQPPEEGLMCELLWSDPQQWMGLGQSKRGV 424
            |.|...|:.||..:|||| |....|||.||.|:|..:.|.:|.||:||||||:...|.|.|.||.
  Rat   150 LSLSAIIDGKIFCVHGGL-SPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGA 213

  Fly   425 GIQFGPDVTEKFCKDNNLDYIIRSHEVKDMGYEVAHNGKCITVFSAPNYCDTMGNMGAFITITGN 489
            |..||.||..:|...|::|...|:|::...||:...|...:||:||||||...||:.|.:.: ..
  Rat   214 GYLFGSDVVAQFNAANDIDMTCRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILEL-DE 277

  Fly   490 NLKPNYKSFEAVPH-----PDVKPMA 510
            :|:.::..|||.|.     |..||:|
  Rat   278 HLQKDFIIFEAAPQETRGIPSKKPVA 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 123/286 (43%)
PP2Ac 226..502 CDD:197547 118/271 (44%)
Ppp4cNP_599186.1 PTZ00239 6..307 CDD:173488 123/286 (43%)
MPP_PP2A_PP4_PP6 6..290 CDD:277360 118/271 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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