DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and ppef2a

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_009300090.1 Gene:ppef2a / 100537120 ZFINID:ZDB-GENE-160512-2 Length:796 Species:Danio rerio


Alignment Length:431 Identity:132/431 - (30%)
Similarity:198/431 - (45%) Gaps:118/431 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 EMYSDMENITIEDDYKGPQLEDGKVTLKFMKELMEHYK-AQKRLHRKFAYKILCEIDTYMRAQPS 247
            |.|.:..||.:.|.|.||:| ...:.:....:|:|.:| .|::||.::..::|.|....:|..|:
Zfish   107 ERYFNYTNIDVPDIYSGPRL-TFPLDMDQAADLVEAFKNKQQQLHSRYVLQLLLETWKLLRVLPN 170

  Fly   248 LVDITVPDEEKFTICGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFVDRGSFSVECIFTLFGFK 312
            :..::....::.|||||:|||..||:.||..||:||.:.||:||||:||||..|:|.:..||.|.
Zfish   171 INRVSTCHSKEITICGDLHGQLEDLLLIFYKNGMPSMEKPYVFNGDYVDRGKDSMEVLLILFAFL 235

  Fly   313 LLYPNHFFLARGNHESINMNQMYGFTGEVTAKYT---SAMADIFTQVFNWLPLCHCINQKILVMH 374
            |:||...:|.|||||...:|..||||.||..||.   ..:..:..::|:||||...|:|::|::|
Zfish   236 LVYPGDVYLNRGNHEDHIINLRYGFTKEVLGKYKLHGKRILKLLQKIFSWLPLVTVIDQRVLIVH 300

  Fly   375 GGLFSTEDVTLDHIRRIERN-----CQPP------------------------------------ 398
            ||:..:.::.|  |.|::|:     .:||                                    
Zfish   301 GGISDSTNLAL--IARVDRHRYVSALRPPRKTTPSCSNFYADSEHFGKVVICQNRRGSLTFPSQF 363

  Fly   399 ----------------------EEGL--------------------------------------- 402
                                  ||.|                                       
Zfish   364 GARDSFQRRSLQDFSRTVARTVEEELEVRRRQAEFSLSSFSKSQHILRSTQSTESEPESSEFTDT 428

  Fly   403 -------MCELLWSDPQQWMG-LGQSKRGVGIQFGPDVTEKFCKDNNLDYIIRSHEVKDMGYEVA 459
                   :.:||||||....| :....||.|..:||::||.|...:||..||||||.|..|||..
Zfish   429 SNDEWKQILDLLWSDPMSQDGCVPNEVRGGGCYWGPNITEDFLNRHNLQLIIRSHECKQDGYEFC 493

  Fly   460 HNGKCITVFSAPNYCDTMGNMGAFITITGNNLKPNYKSFEA 500
            ||.|.:|:|||.||.:...|.|||:.: |.:|.|.:..::|
Zfish   494 HNRKVVTLFSASNYYEIGSNRGAFVRL-GPDLMPYFIQYQA 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 127/417 (30%)
PP2Ac 226..502 CDD:197547 119/388 (31%)
ppef2aXP_009300090.1 MPP_superfamily 129..532 CDD:301300 122/405 (30%)
PP2Ac 149..535 CDD:197547 119/388 (31%)
EF-hand_7 568..674 CDD:290234
EFh 652..717 CDD:238008
EF-hand_7 652..716 CDD:290234
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D215218at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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