DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpD3 and ppp4ca

DIOPT Version :9

Sequence 1:NP_001262433.1 Gene:PpD3 / 49779 FlyBaseID:FBgn0005777 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001103884.1 Gene:ppp4ca / 100003080 ZFINID:ZDB-GENE-030131-4433 Length:311 Species:Danio rerio


Alignment Length:286 Identity:121/286 - (42%)
Similarity:163/286 - (56%) Gaps:16/286 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 KILCEIDTYMRAQPSLVDITVPD--EEKFTICGDIHGQFYDLMNIFEINGLPSEKNPYLFNGDFV 295
            |.||     .:|:..||:.:...  :...|:|||||||||||..:|.:.|...|.| |||.||||
Zfish    30 KALC-----AKAREILVEESNVQSVDSPVTVCGDIHGQFYDLKELFRVGGEVPETN-YLFMGDFV 88

  Fly   296 DRGSFSVECIFTLFGFKLLYPNHFFLARGNHESINMNQMYGFTGEVTAKYTSAMADIF-TQVFNW 359
            |||.:|||....|...|:.||:...|.||||||..:.|:|||..|...||.||....: |::|::
Zfish    89 DRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFFDECHRKYGSATVWRYCTEIFDY 153

  Fly   360 LPLCHCINQKILVMHGGLFSTEDVTLDHIRRIERNCQPPEEGLMCELLWSDPQQWMGLGQSKRGV 424
            |.|...::.||..:|||| |....|||.||.|:|..:.|.:|.||:||||||:...|.|.|.||.
Zfish   154 LSLSAIVDGKIFCVHGGL-SPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDPEDTTGWGVSPRGA 217

  Fly   425 GIQFGPDVTEKFCKDNNLDYIIRSHEVKDMGYEVAHNGKCITVFSAPNYCDTMGNMGAFITITGN 489
            |..||.||..:|...|::..|.|:|::...||:...|...:||:||||||...||:.|.:.: ..
Zfish   218 GYLFGSDVVAQFNAANDISMICRAHQLVMEGYKWHFNDTVLTVWSAPNYCYRCGNVAAILEL-DE 281

  Fly   490 NLKPNYKSFEAVPH-----PDVKPMA 510
            :|:..:..|||.|.     |..||:|
Zfish   282 HLQKEFIIFEAAPQETRGLPSKKPVA 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpD3NP_001262433.1 TPR_11 49..114 CDD:290150
TPR_1 49..81 CDD:278916
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
MPP_PP5_C 198..513 CDD:277362 121/286 (42%)
PP2Ac 226..502 CDD:197547 116/271 (43%)
ppp4caNP_001103884.1 PTZ00239 10..311 CDD:173488 121/286 (42%)
MPP_PP2A_PP4_PP6 10..294 CDD:277360 116/271 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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