DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment OPA1 and opa1

DIOPT Version :10

Sequence 1:XP_047304162.1 Gene:OPA1 / 4976 HGNCID:8140 Length:1047 Species:Homo sapiens
Sequence 2:XP_009300789.1 Gene:opa1 / 492332 ZFINID:ZDB-GENE-041114-7 Length:1034 Species:Danio rerio


Alignment Length:1010 Identity:777/1010 - (76%)
Similarity:873/1010 - (86%) Gaps:24/1010 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     7 AAVACEVCQSLVKHSSGIKGSLPLQKLHLVSRSIYHSHHPTLKLQRPQLRTSFQQFSSLTNLPLR 71
            :.|.|..|:.|:....|:|..:||||||.:||:|:|.:......|||...::.:.::||:.||:|
Zfish     6 SVVTCIACKGLLPSRMGVKFRVPLQKLHPLSRAIHHRYSANNNPQRPPHCSAARHYTSLSRLPMR 70

Human    72 KLKFSPIKYGYQPRRNFWPARLATRLLKLRYLILGSAVGGGYTAKKTFDQWKDMIPDLSEYKWIV 136
            ..|.....:|||..|.||.||||.|||||||::||||||||||||||:|:||:|:||:|||.|||
Zfish    71 PPKSRSGGHGYQQHRTFWVARLAARLLKLRYILLGSAVGGGYTAKKTYDEWKEMLPDMSEYTWIV 135

Human   137 PDIVWEIDEYIDFEKIRKALPSSEDLVKLAPDFDKIVESLSLLKDFFTSGHKLVSEVIGASDLLL 201
            ||.|||:.|.||.:|:..|||..|::.||.||.:||.|:.:.||...:||  |.|||.|||.|.|
Zfish   136 PDFVWELSENIDLDKLASALPELEEIAKLLPDMEKIGENFTFLKSLLSSG--LGSEVNGASGLRL 198

Human   202 LLGSPEETAFRATD-------RGSESDKHFRK-GLLGELILLQQQIQEHEEEARRAAGQY----- 253
            ||.:..|:|.||.|       .....||.|:| |||.|||::|||||:||||.||||...     
Zfish   199 LLETTGESALRAPDVPPASAAMADSGDKQFKKQGLLSELIVIQQQIQQHEEEMRRAAANNAPPPP 263

Human   254 ---------STSYAQQKRKVSDKEKIDQLQEELLHTQLKYQRILERLEKENKELRKLVLQKDDKG 309
                     :.|.:|.|||.|||||:||||||||.|||||||:|||||||||||||:||||||||
Zfish   264 RDPSPSPAPNPSPSQSKRKSSDKEKVDQLQEELLRTQLKYQRMLERLEKENKELRKVVLQKDDKG 328

Human   310 IHHRKLKKSLIDMYSEVLDVLSDYDASYNTQDHLPRVVVVGDQSAGKTSVLEMIAQARIFPRGSG 374
            ||.||:|||||||||||||:|||||::||||||||||||||||||||||||||||||||||||||
Zfish   329 IHQRKVKKSLIDMYSEVLDILSDYDSNYNTQDHLPRVVVVGDQSAGKTSVLEMIAQARIFPRGSG 393

Human   375 EMMTRSPVKVTLSEGPHHVALFKDSSREFDLTKEEDLAALRHEIELRMRKNVKEGCTVSPETISL 439
            ||||||||||||||||||||:||||||||||.||||||||||||||||||:||||.|||||||||
Zfish   394 EMMTRSPVKVTLSEGPHHVAMFKDSSREFDLGKEEDLAALRHEIELRMRKSVKEGQTVSPETISL 458

Human   440 NVKGPGLQRMVLVDLPGVINTVTSGMAPDTKETIFSISKAYMQNPNAIILCIQDGSVDAERSIVT 504
            :|||||:||||||||||||:|||:|||.|||||||||||||||||||||||||||||||||||||
Zfish   459 SVKGPGIQRMVLVDLPGVISTVTTGMAADTKETIFSISKAYMQNPNAIILCIQDGSVDAERSIVT 523

Human   505 DLVSQMDPHGRRTIFVLTKVDLAEKNVASPSRIQQIIEGKLFPMKALGYFAVVTGKGNSSESIEA 569
            ||||||||.|:|||||||||||||||:|||||||||:||||||||||||||||||||:.:|||::
Zfish   524 DLVSQMDPQGKRTIFVLTKVDLAEKNLASPSRIQQIVEGKLFPMKALGYFAVVTGKGSPNESIDS 588

Human   570 IREYEEEFFQNSKLLKTSMLKAHQVTTRNLSLAVSDCFWKMVRESVEQQADSFKATRFNLETEWK 634
            |::|||:|||||:|||..|||||||||:|||||||||||||||||||||||:|||:|||||||||
Zfish   589 IKDYEEDFFQNSRLLKDGMLKAHQVTTKNLSLAVSDCFWKMVRESVEQQADAFKASRFNLETEWK 653

Human   635 NNYPRLRELDRNELFEKAKNEILDEVISLSQVTPKHWEEILQQSLWERVSTHVIENIYLPAAQTM 699
            ||||||||||||||:|||||||||||||||||||||||.|||:.|||||||||||||||||||||
Zfish   654 NNYPRLRELDRNELYEKAKNEILDEVISLSQVTPKHWESILQKKLWERVSTHVIENIYLPAAQTM 718

Human   700 NSGTFNTTVDIKLKQWTDKQLPNKAVEVAWETLQEEFSRFMTEPKGKEHDDIFDKLKEAVKEESI 764
            ||||||||||||||||||||||:||:|||||||||||:|||.|.|||:.||||||||||||:|||
Zfish   719 NSGTFNTTVDIKLKQWTDKQLPHKALEVAWETLQEEFARFMAEYKGKDQDDIFDKLKEAVKDESI 783

Human   765 KRHKWNDFAEDSLRVIQHNALEDRSISDKQQWDAAIYFMEEALQARLKDTENAIENMVGPDWKKR 829
            ||||||:.|.||||||||||||||||:||.||||||.||||.||:||||||:.|.:|||||||:|
Zfish   784 KRHKWNERAMDSLRVIQHNALEDRSITDKPQWDAAIQFMEETLQSRLKDTESVIADMVGPDWKQR 848

Human   830 WLYWKNRTQEQCVHNETKNELEKMLKCNEEHPAYLASDEITTVRKNLESRGVEVDPSLIKDTWHQ 894
            |:.|||||.||...||||||||::||.:|:|.||||:||:||||||||:|||||||.||||||||
Zfish   849 WMSWKNRTPEQHTRNETKNELERLLKLHEDHTAYLANDEVTTVRKNLEARGVEVDPVLIKDTWHQ 913

Human   895 VYRRHFLKTALNHCNLCRRGFYYYQRHFVDSELECNDVVLFWRIQRMLAITANTLRQQLTNTEVR 959
            ::|||||:.||.||||||||||||||||||||||||||||||||||||.||||||||||||||||
Zfish   914 LFRRHFLQKALLHCNLCRRGFYYYQRHFVDSELECNDVVLFWRIQRMLGITANTLRQQLTNTEVR 978

Human   960 RLEKNVKEVLEDFAEDGEKKIKLLTGKRVQLAEDL 994
            |||||||||||||.||.|||::|:||:||||||||
Zfish   979 RLEKNVKEVLEDFGEDNEKKVQLITGRRVQLAEDL 1013

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OPA1XP_047304162.1 DLP_1 342..616 CDD:206738 248/273 (91%)
OPA1_C 672..994 CDD:466080 269/321 (84%)
opa1XP_009300789.1 DLP_1 361..635 CDD:206738 248/273 (91%)
OPA1_C 691..1034 CDD:466080 271/323 (84%)

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