DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gish and HRR25

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_015120.1 Gene:HRR25 / 855897 SGDID:S000006125 Length:494 Species:Saccharomyces cerevisiae


Alignment Length:518 Identity:200/518 - (38%)
Similarity:278/518 - (53%) Gaps:85/518 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LMVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAP 120
            |.||..||:|:|||.|:||::..|.||.:.|.||||:|.::|:.|||..|.|.|:.|....    
Yeast     3 LRVGRKFRIGRKIGSGSFGDIYHGTNLISGEEVAIKLESIRSRHPQLDYESRVYRYLSGGV---- 63

  Fly   121 DGIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIY 185
             |||.|...|. .|.|||||::|||.|||||||.|.|:||.|||:|:|.|:..||:|:|.|..|:
Yeast    64 -GIPFIRWFGR-EGEYNAMVIDLLGPSLEDLFNYCHRRFSFKTVIMLALQMFCRIQYIHGRSFIH 126

  Fly   186 RDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGRE 250
            ||:||:|||:|  ..:|...:|:|||||:|:|.|.:|:|||||||:|||||||||.|:|||:|.|
Yeast   127 RDIKPDNFLMG--VGRRGSTVHVIDFGLSKKYRDFNTHRHIPYRENKSLTGTARYASVNTHLGIE 189

  Fly   251 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLRY 315
            ||||||||:||::.:||.:||||||||||.|.|::|.:|.:.|....:|.||.|.|.||..|:.|
Yeast   190 QSRRDDLESLGYVLIYFCKGSLPWQGLKATTKKQKYDRIMEKKLNVSVETLCSGLPLEFQEYMAY 254

  Fly   316 VRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWT----GKTMSTPVGSLQTGHEVIISPNKD 376
            .:.|.|.|.|||.||.|||:||..:..|.::..||||    .|.|      ::...:::|    :
Yeast   255 CKNLKFDEKPDYLFLARLFKDLSIKLEYHNDHLFDWTMLRYTKAM------VEKQRDLLI----E 309

  Fly   377 RHNVTAKTNAKGGVAAWPDVPKPGATLGNL---------------------TPADRHGSVQVVSS 420
            :.::.|.:||   .:|.........|...:                     .|:......|.:.:
Yeast   310 KGDLNANSNA---ASASNSTDNKSETFNKIKLLAMKKFPTHFHYYKNEDKHNPSPEEIKQQTILN 371

  Fly   421 TNGE-------LNPDDPTAGHSNTPITQQPEVEVVDETKCCCFFKRKKKKSTRQKXLDGVQCSPE 478
            .|..       ||..|  .|..|.. .|||:.:|              :.|..|. ...:|..|.
Yeast   372 NNAASSLPEELLNALD--KGMENLR-QQQPQQQV--------------QSSQPQPQPQQLQQQPN 419

  Fly   479 REAVT-----LLRATSHSNSRDSVLNNPSQDYIQQATSQHTLRYPPSASMLTPTPTTNTPTLP 536
            .:...     ||:    ...|||   ...|..:..||::.| :|||..:  :....||..::|
Yeast   420 GQRPNYYPEPLLQ----QQQRDS---QEQQQQVPMATTRAT-QYPPQIN--SNNFNTNQASVP 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 158/296 (53%)
S_TKc 62..335 CDD:214567 150/272 (55%)
CK1gamma_C 354..428 CDD:289378 13/101 (13%)
HRR25NP_015120.1 PKc_like 8..282 CDD:419665 153/281 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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