DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and YCK2

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_014245.1 Gene:YCK2 / 855568 SGDID:S000005098 Length:546 Species:Saccharomyces cerevisiae


Alignment Length:535 Identity:211/535 - (39%)
Similarity:289/535 - (54%) Gaps:79/535 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PSAGNVANATTALAGGKSSSNNMYSTRQSVSTTTGVLMVGPNFRVGKKIGCGNFGELRLGKNLYN 84
            |.:.:|::......|..|:|   ||..||...:|   :||.::::|||||.|:||.|..|.|:.|
Yeast    40 PPSLHVSSNLNHNTGNSSAS---YSGSQSRDDST---IVGLHYKIGKKIGEGSFGVLFEGTNMIN 98

  Fly    85 NEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAPDGIPRIYHLGTCGGRYNAMVLELLGLSLE 149
            ...||||.||.|::||||..|||.||:|.     ...|||:.|:.|. .|.:|.:|::|||.|||
Yeast    99 GLPVAIKFEPRKTEAPQLKDEYRTYKILA-----GTPGIPQEYYFGQ-EGLHNILVIDLLGPSLE 157

  Fly   150 DLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYRDVKPENFLIGRTSTKREKIIHIIDFGLA 214
            |||:.|.|:||:|||:.:|.|::..||.:|:..|||||:||:||||||........:|:||||:|
Yeast   158 DLFDWCGRRFSVKTVVQVAVQMITLIEDLHAHDLIYRDIKPDNFLIGRPGQPDANKVHLIDFGMA 222

  Fly   215 KEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGLKA 279
            |:|.|..|.:||||||.|||:|||||||||||:|||||||||:||:||:|.|||||.||||||||
Yeast   223 KQYRDPKTKQHIPYREKKSLSGTARYMSINTHLGREQSRRDDMEAMGHVFFYFLRGQLPWQGLKA 287

  Fly   280 DTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYT 344
            ...|::|:|||:.||.|.:..|..|.|.:|..||..||.|.|.|||||:..|.|...:.|..|.|
Yeast   288 PNNKQKYEKIGEKKRLTNVYDLAQGLPIQFGRYLEIVRNLSFEETPDYEGYRMLLLSVLDDLGET 352

  Fly   345 DEGEFDWTGKTMSTPVGSLQTGHEVIISPNKDRHNVTAKTNAKGGVAAWPDVPKPGATLGNLTPA 409
            .:|::||.         .|..|....:|.||       |.|..|  ...|:.|.        ..:
Yeast   353 ADGQYDWM---------KLNGGRGWDLSINK-------KPNLHG--YGHPNPPN--------EKS 391

  Fly   410 DRHGSVQVVSSTNGELNPDDPTAGHSNTPITQQPEVEVVDETKCCCFFKRKK-KKSTRQKXLDGV 473
            .||      .|.|.:.:  .|...|......||.:.:...:.:.....:::: :::..|:..:..
Yeast   392 KRH------RSKNHQYS--SPDHHHHYNQQQQQQQAQAQAQAQAQAKVQQQQLQQAQAQQQANRY 448

  Fly   474 QCSP-------EREAVTLLRATSHSNSRDSVLNNPSQDYIQQATSQ---------------HTLR 516
            |..|       |||| :.|..||:    ::......|.|.||...|               .|.:
Yeast   449 QLQPDDSHYDEEREA-SKLDPTSY----EAYQQQTQQKYAQQQQKQMQQKSKQFANTGANGQTNK 508

  Fly   517 YPPSASMLTPTPTTN 531
            ||.:|.     ||.|
Yeast   509 YPYNAQ-----PTAN 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 159/292 (54%)
CK1gamma_C 354..439 CDD:463640 16/84 (19%)
YCK2NP_014245.1 STKc_CK1_fungal 75..351 CDD:271029 154/281 (55%)

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