DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and ckl12

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_680447.1 Gene:ckl12 / 835804 AraportID:AT5G57015 Length:435 Species:Arabidopsis thaliana


Alignment Length:461 Identity:195/461 - (42%)
Similarity:270/461 - (58%) Gaps:73/461 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAPDG 122
            ||..:|:|:|||.|:|||:.||.::..||.||||:|.:|:|.|||..|.:.|::|     ....|
plant     5 VGNKYRLGRKIGSGSFGEIYLGTHIQTNEEVAIKLENVKTKHPQLLYESKLYRIL-----QGGTG 64

  Fly   123 IPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYRD 187
            :|.|...|. .|.||.:|::|||.|||||||.|:||.|||:|||:|.|:::|:||.||:..::||
plant    65 VPNIKWFGV-EGDYNTLVMDLLGPSLEDLFNFCSRKLSLKSVLMLADQMINRVEYFHSKSFLHRD 128

  Fly   188 VKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGREQS 252
            :||:|||:|  ..:|...:|||||||||:|.|..|::||||||:|:|||||||.|:|||:|.|||
plant   129 LKPDNFLMG--LGRRANQVHIIDFGLAKKYRDNTTHQHIPYRENKNLTGTARYASMNTHLGIEQS 191

  Fly   253 RRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLRYVR 317
            ||||||:||::.||||:||||||||||.|.|::|::|.:.|.:|.||.||.|:|.|||:|..|.|
plant   192 RRDDLESLGYILMYFLKGSLPWQGLKAGTKKQKYERISEKKVSTSIESLCRGYPSEFASYFHYCR 256

  Fly   318 RLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWT----------------------GKTMSTPV 360
            .|.|.:.|||.:|:|:|:|||.|:|:..:..||||                      |.:...|.
plant   257 SLRFDDKPDYGYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLTAPPSRGLVSPAVGTSAGLPP 321

  Fly   361 GSLQT----GHEVIISPNKD--RHNVTAKTNAKGGVAAWPDVPKPGATLGNLTP-----ADRHGS 414
            |....    |.|....|..|  |..::......|.:          ::.|.:.|     |...||
plant   322 GLTSIDRYGGEEEGGRPPMDSSRRRMSGALENSGNL----------SSRGPMMPSSSLFAQSAGS 376

  Fly   415 VQVVSSTNGELNPDDPTAGHSNTPITQQPEVEVVDETKCCCFFKRKKKKSTRQ------KXLDGV 473
            .:.|  |:.||......||..|:|:...||              .|:..|||:      | ::.:
plant   377 SRRV--TSEELQRCRTGAGLRNSPVVTTPE--------------GKRSSSTRKHYDSAIKGIETL 425

  Fly   474 QCSPER 479
            |.|.||
plant   426 QVSDER 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 160/314 (51%)
CK1gamma_C 354..439 CDD:463640 20/95 (21%)
ckl12NP_680447.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 155/281 (55%)

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