DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and ckl8

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_199146.1 Gene:ckl8 / 834350 AraportID:AT5G43320 Length:480 Species:Arabidopsis thaliana


Alignment Length:505 Identity:211/505 - (41%)
Similarity:291/505 - (57%) Gaps:68/505 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 MVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAPD 121
            :||..:::|:|:|.|:||||.||.|:...|.||:|:||.:::.||||.|.:.|.||     ....
plant     4 VVGGKYKLGRKLGSGSFGELFLGVNVQTGEEVAVKLEPARARHPQLHYESKLYMLL-----QGGT 63

  Fly   122 GIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYR 186
            |||.:...|. .|.||.||::|||.|:|||||.|:|:|:||||||:|.|:::|:||:|.|..::|
plant    64 GIPHLKWYGV-EGEYNCMVIDLLGPSMEDLFNYCSRRFNLKTVLMLADQMINRVEYMHVRGFLHR 127

  Fly   187 DVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGREQ 251
            |:||:|||:|  ..::...::|||:||||:|.||.|:|||||||:|:|||||||.|:|||:|.||
plant   128 DIKPDNFLMG--LGRKANQVYIIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQ 190

  Fly   252 SRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLRYV 316
            |||||||:||::.|||||||||||||:|.|.|::|.||.:.||.||:||||...|.||.:|..||
plant   191 SRRDDLESLGYVLMYFLRGSLPWQGLRAGTKKQKYDKISEKKRLTPVEVLCKSFPPEFTSYFLYV 255

  Fly   317 RRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWTGKTMSTPVGSLQTGHEVIISPNKDRHNVT 381
            |.|.|.:.|||.:|:|||:|||.|:||..:..||||  .:..|  ...:|..   |.:|.|.::.
plant   256 RSLRFEDKPDYPYLKRLFRDLFIREGYQFDYVFDWT--ILKYP--QFSSGSS---SSSKPRSSLR 313

  Fly   382 AKTNAKGGVAAWPDVPKPGATLGNLTPADR-HGSVQVVSSTNGE------------LNPDDPTAG 433
            ...|....:|..||.|..||   .....|| .|:::..:..||.            ...::..|.
plant   314 PAMNPPVPIAERPDKPSAGA---GQDSRDRFSGALEAYARRNGSGSGVVQADRSRPRTSENVLAS 375

  Fly   434 HSNTPITQQPEVEVVDETKCCCFFKRKKKKSTRQKXLDGVQCSPEREAVTLLRATSHSNSRDSVL 498
            ..:|.......||             :...|||..       |..:..|:.:||||   |.|...
plant   376 SKDTTPQNYERVE-------------RPISSTRHAS------SSRKAVVSSVRATS---SADFTE 418

  Fly   499 NN-----PSQDYIQQATSQHTLRYP-----PSASMLT---PTPTTNTPTL 535
            |.     ||..  :.:|:|.|...|     ||:|..|   |:.|....||
plant   419 NRSSRVVPSNG--RSSTAQRTQLVPDPTTRPSSSSFTRAAPSRTARDITL 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 162/292 (55%)
CK1gamma_C 354..439 CDD:463640 19/97 (20%)
ckl8NP_199146.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 156/281 (56%)
PHA03307 318..>461 CDD:223039 38/169 (22%)

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