DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and AT5G18190

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001332666.1 Gene:AT5G18190 / 831937 AraportID:AT5G18190 Length:691 Species:Arabidopsis thaliana


Alignment Length:413 Identity:118/413 - (28%)
Similarity:191/413 - (46%) Gaps:72/413 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RRERQASGGGPQTTTAG--------------------PSAGN--------VANATTALAGGKSSS 39
            |....|.|..|.....|                    |:.|.        ||....|:.||  |:
plant    41 RGRGNAKGAAPPRPAGGVGRGRGIRLIDLEAEPCEVRPAVGEPAFNQVEAVAEKDIAMEGG--SA 103

  Fly    40 NNMYSTRQSVSTTTGV---LMVG--PNFRVGKKIGCGNFGELRLGKNLYNNE--------HVAIK 91
            ..:....:. |:|..|   :.||  |.::..:|:|.|.||::.:|:.:....        .||:|
plant   104 EKVVGVEED-SSTAPVPERVQVGNSPVYKTERKLGKGGFGQVFVGRRVSGGSDRIGADAIEVALK 167

  Fly    92 MEPMKSKAPQL--HLEYRFYKLLGSHADNAPDGIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNI 154
            .|...||....  ..|::.|..|     |...|:|.::|.|..|..| .:|:::||.||.|::|.
plant   168 FEHRNSKGCNFGPPYEWQVYNTL-----NGCYGVPAVHHKGRQGDFY-ILVMDMLGPSLWDVWNS 226

  Fly   155 CARKFSLKTVLMIAKQLLHRIEYVHSRHLIYRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYID 219
            ..:..|...|..||.:.:..:|.:|.:..::.||||||||:|:..|..||.:::||.|||.::.|
plant   227 SGQSMSPNMVACIAVESISILEKLHMKGFVHGDVKPENFLLGQPGTADEKKLYLIDLGLASKWKD 291

  Fly   220 LDTNRHIPYREHKSL-TGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK 283
            ..:.:|:.|.:...: .||.||.|::.|:||..|||||||:|.:..::.|:|.|||||.:.|   
plant   292 SHSGQHVEYDQRPDVFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLLKGRLPWQGYQGD--- 353

  Fly   284 ERYQKIGDTKRATPIEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGE 348
            .:...:...|.:|..|::|...|..|..:|..|..:.|.|.|:|..|..:|..|.::        
plant   354 NKSFLVCKKKMSTSPELMCCFCPPPFKLFLEAVTNMKFDEEPNYAKLISIFDSLIEQ-------- 410

  Fly   349 FDWTGKTMSTPV---GSLQTGHE 368
                 ..:|.|:   |:|:.|.:
plant   411 -----CALSRPIKIDGALKVGQK 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 94/303 (31%)
S_TKc 62..335 CDD:214567 92/283 (33%)
CK1gamma_C 354..428 CDD:289378 5/18 (28%)
AT5G18190NP_001332666.1 STKc_CK1 130..404 CDD:270918 92/282 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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