DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and ckl3

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001329054.1 Gene:ckl3 / 829009 AraportID:AT4G28880 Length:415 Species:Arabidopsis thaliana


Alignment Length:397 Identity:185/397 - (46%)
Similarity:248/397 - (62%) Gaps:36/397 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 MVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLL--GSHADNA 119
            ::|..:::|:|||.|:|||:.|..::...|.||:|:|..|:|.|||..|.:.|::|  ||     
plant     4 IIGGKYKLGRKIGGGSFGEIFLATHVDTFEIVAVKIENSKTKHPQLLYEAKLYRILEGGS----- 63

  Fly   120 PDGIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLI 184
              |||||...|. .|..||:|::|||.||||||..|.||||.|||||:|.|:|.|||:|||:..:
plant    64 --GIPRIKWFGV-DGTENALVMDLLGPSLEDLFVYCGRKFSPKTVLMLADQMLTRIEFVHSKGYL 125

  Fly   185 YRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGR 249
            :||:||:|||:|  ..::...:::|||||||.|.|.:|||||||||:|:|||||||.|.|||:|.
plant   126 HRDIKPDNFLMG--LGRKANQVYLIDFGLAKRYRDANTNRHIPYRENKNLTGTARYASCNTHLGI 188

  Fly   250 EQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLR 314
            |||||||||:||::.:||||||||||||||...|::|.||.:.|.:|||||||..||.|||:|..
plant   189 EQSRRDDLESLGYVLLYFLRGSLPWQGLKAVDKKQKYDKICEKKISTPIEVLCKNHPVEFASYFH 253

  Fly   315 YVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWT-----------GKTMSTPVGSLQTGHE 368
            |...|.|.:.|||.||:|||:|||.|:||..:..||||           .::.:.|..|......
plant   254 YCHTLTFDQRPDYGFLKRLFRDLFSREGYEFDYIFDWTIIKYQQAQKSRNQSQAVPGSSNPRAMP 318

  Fly   369 VIISPNKDRHNVTAKTNAKGGVAAWPDVPKPGATLGNLTPADRHGSVQVVSSTNGELNPDDPTAG 433
            |..|.::...|::.:..|...|.: .:...|...:.|.|.|.|         |.|.   |.|...
plant   319 VDTSNHRGGPNISYEAEASERVRS-ANAIGPSPQINNNTAAGR---------TPGF---DHPVHK 370

  Fly   434 HSNTPIT 440
            :.|.|.|
plant   371 NMNMPST 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 165/305 (54%)
S_TKc 62..335 CDD:214567 154/274 (56%)
CK1gamma_C 354..428 CDD:289378 14/73 (19%)
ckl3NP_001329054.1 PKc_like 8..282 CDD:419665 159/283 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11909
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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