DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and CK1

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_194340.1 Gene:CK1 / 828716 AraportID:AT4G26100 Length:450 Species:Arabidopsis thaliana


Alignment Length:468 Identity:192/468 - (41%)
Similarity:274/468 - (58%) Gaps:73/468 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAPDG 122
            ||..||:|:|||.|:|||:.||.|::.||.:|||:|.:|:|.|||..|.:.|::|     ....|
plant     5 VGNKFRLGRKIGSGSFGEIYLGTNIHTNEELAIKLENVKTKHPQLLYESKLYRIL-----QGGTG 64

  Fly   123 IPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYRD 187
            :|.:...|. .|.||.:|::|||.|||||||.|:||.|||:|||:|.|:::|:|:.||:..::||
plant    65 VPNVKWFGV-EGDYNVLVMDLLGPSLEDLFNFCSRKLSLKSVLMLADQMINRVEFFHSKSFLHRD 128

  Fly   188 VKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGREQS 252
            :||:|||:|  ..:|...::||||||||:|.|..|::||||||:|:|||||||.|:|||:|.|||
plant   129 LKPDNFLMG--LGRRANQVYIIDFGLAKKYRDSTTHQHIPYRENKNLTGTARYASMNTHLGIEQS 191

  Fly   253 RRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLRYVR 317
            ||||||:||::.||||:||||||||||.|.|::|::|.:.|.:|.||.||.|:|.|||:|..|.|
plant   192 RRDDLESLGYILMYFLKGSLPWQGLKAGTKKQKYERISEKKVSTSIEALCRGYPSEFASYFHYCR 256

  Fly   318 RLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWT---------------------GKTMSTPVG 361
            .|.|.:.|||.:|:|:|:|||.|:|:..:..||||                     |.:.:.|.|
plant   257 SLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLTAPPSRALNPAVGTSAALPPG 321

  Fly   362 ----SLQTGHEVIISPNKD--RHNVTAKTNAKGGVAAWPDVPKPGATLGNLTP-----ADRHGSV 415
                ...||.|. ..|:.:  |..|:...:..|.::   :.|...:...::.|     |...||.
plant   322 ISNIDRYTGEEE-GRPHMESSRRRVSGALDNSGNIS---NQPTSSSARDSMIPSSSLFAQSAGSS 382

  Fly   416 QVVSSTNG---------ELNPDDPTAGHSNTPITQQPEVEVVDETKCCCFFKRKKKKSTRQ---- 467
            :.|::.:|         ||.....|...|...|.:....|.              .||||:    
plant   383 RRVTAVSGSRDNFPGSEELLQRSRTGDVSRGVIPRNSPGEA--------------GKSTRRHYES 433

  Fly   468 --KXLDGVQCSPE 478
              | :|.:|.|.|
plant   434 VVKGIDNLQVSDE 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 158/313 (50%)
CK1gamma_C 354..439 CDD:463640 20/104 (19%)
CK1NP_194340.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 153/281 (54%)

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