DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and ckl10

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_188976.1 Gene:ckl10 / 821915 AraportID:AT3G23340 Length:442 Species:Arabidopsis thaliana


Alignment Length:432 Identity:196/432 - (45%)
Similarity:265/432 - (61%) Gaps:54/432 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 MVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAPD 121
            ::|..|::|:|||.|:||||.:|.|:...|.||:|:||:|:|.||||.|.:.|.||     ....
plant     4 VIGGKFKLGRKIGSGSFGELYIGINVQTGEEVALKLEPVKTKHPQLHYESKVYMLL-----QGGT 63

  Fly   122 GIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYR 186
            |:|.|...|. .|.||.|.::|||.|||||||.|.|.||||||||:|.||::|:||:|||..::|
plant    64 GVPHIKWFGV-EGNYNCMAIDLLGPSLEDLFNYCTRSFSLKTVLMLADQLINRVEYMHSRGFLHR 127

  Fly   187 DVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGREQ 251
            |:||:|||:|  ..::...::|||:||||:|.||.|::||||||:|:|||||||.|:|||:|.||
plant   128 DIKPDNFLMG--LGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQ 190

  Fly   252 SRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLRYV 316
            |||||||:||::.|||:|||||||||||.|.|::|:||.:.|..||:||||..:|.||.:|..|.
plant   191 SRRDDLESLGYVLMYFIRGSLPWQGLKAGTKKQKYEKISEKKMLTPVEVLCKSYPSEFTSYFHYC 255

  Fly   317 RRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWTGKTMSTPVGSLQTGHEVIISPNK----DR 377
            |.|.|.:.|||.:|:|||:|||.|:||..:..||||  .:..|    |:|......||.    |.
plant   256 RSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWT--ILKYP----QSGSISKPRPNPKPALDP 314

  Fly   378 HNVTAKTNAK------------GGVAAWP--DVPKPGATLGNLTPADRHGSVQVVSST------- 421
            ...:|:.|.|            |.|.|:.  :||..|....::...|....|||...|       
plant   315 PGPSAERNEKPIVGQDLRERFSGAVEAFARRNVPSHGIRPKHIFSDDASKEVQVSEKTRNEIATK 379

  Fly   422 -----------NGELNPDDPTAGHSNTPITQQPEVEVVDETK 452
                       :|||:.:..:...|::....||    |.|||
plant   380 MAVMSSSQPGSSGELSENRSSKLFSSSAQKIQP----VQETK 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 165/292 (57%)
CK1gamma_C 354..439 CDD:463640 24/120 (20%)
ckl10NP_188976.1 STKc_CK1_delta_epsilon 8..282 CDD:271027 159/281 (57%)

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