DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and AT3G03940

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_187044.1 Gene:AT3G03940 / 819551 AraportID:AT3G03940 Length:701 Species:Arabidopsis thaliana


Alignment Length:410 Identity:119/410 - (29%)
Similarity:194/410 - (47%) Gaps:63/410 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ASGGG---------PQTTTAGPSAG-------------NVANATTALAGGKSSSNNMYSTRQSVS 50
            |:|.|         |:.....|:||             .||:...|..||.:..........|:.
plant    62 AAGRGRGIRLTDLEPEPCEVRPAAGAIGATEPALNRVEGVADKDIAAEGGSAEKVVGMEEDSSMG 126

  Fly    51 TTTGVLMVG--PNFRVGKKIGCGNFGELRLGKNLYNNE--------HVAIKMEPMKSKAPQL--H 103
            .....:.||  |.::..:|:|.|.||::.:|:.:....        .||:|:|...||....  .
plant   127 PVPERVQVGNSPVYKTERKLGKGGFGQVYVGRRVSGGSDRIGADAIEVALKLEHRNSKGCNFGPP 191

  Fly   104 LEYRFYKLLGSHADNAPDGIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIA 168
            .|::.|..|     |:..|||.::|.|..|..| .:|:::||.||.|::|..|:..|...|..||
plant   192 YEWQVYNTL-----NSCYGIPAVHHKGRQGDFY-ILVMDMLGPSLWDVWNSLAQSMSPNMVACIA 250

  Fly   169 KQLLHRIEYVHSRHLIYRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKS 233
            .:.:..:|.:|.:..::.||||||||:|:..|..||.:::||.|||..:.|..:.:|:.|.:...
plant   251 VEAISILEKLHMKGFVHGDVKPENFLLGQPGTADEKKLYLIDLGLASRWKDSHSGQHVEYDQRPD 315

  Fly   234 L-TGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP 297
            : .||.||.|.:.|:||..|||||||:|.:..::.:||.|||||.:.|   .:...:...|.:|.
plant   316 VFRGTIRYASCHAHLGRTGSRRDDLESLAYTLIFLMRGRLPWQGYQGD---NKSFLVCKKKMSTS 377

  Fly   298 IEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWTGKTMSTPV-- 360
            .|::|...|..|..:|..|..:.|.|.|:|..|..:|..|.:             ...:|.|:  
plant   378 PELMCCFCPPPFKLFLEAVTNMKFDEEPNYAKLISIFDTLIE-------------PCAISRPIRI 429

  Fly   361 -GSLQTGHE---VIISPNKD 376
             |:|:.|.:   ::|:..:|
plant   430 DGALKVGQKRGRLLINLEED 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 96/303 (32%)
S_TKc 62..335 CDD:214567 94/283 (33%)
CK1gamma_C 354..428 CDD:289378 7/29 (24%)
AT3G03940NP_187044.1 STKc_CK1 140..414 CDD:270918 94/282 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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