DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gish and Vrk2

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_081536.2 Gene:Vrk2 / 69922 MGIID:1917172 Length:503 Species:Mus musculus


Alignment Length:521 Identity:131/521 - (25%)
Similarity:193/521 - (37%) Gaps:137/521 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 MVGPNFRVGKKIGCGNFGELRLG--KNLYNNE--HVAIKMEPMKSKAPQLHLEYRFYKLLGSH-- 115
            |.|..:.:||.||.|.||.:.|.  .|..|.:  || ||:| .:...| |..|.:||:.....  
Mouse    24 MEGNRWALGKMIGSGGFGLIYLAFPTNKPNKDARHV-IKLE-YQENGP-LFSELKFYQRAAKREC 85

  Fly   116 -----ADNAPD--GIPRIYHLGTC---GGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQ 170
                 .....|  |||..|..|..   |..|..||:|.||:.|:.|.:... .|...|||.:..:
Mouse    86 IQKWIQQRKLDYLGIPVFYGFGLTDFKGRSYRFMVMERLGIDLQKLLDQNG-GFKKLTVLQLGIR 149

  Fly   171 LLHRIEYVHSRHLIYRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYRE--HKS 233
            :|..:||:|....::.|:|..|.|:..|:..|   :::.|:||:..|  .....|..|:|  .|.
Mouse   150 MLDVLEYIHENEYVHGDIKAANLLLDFTNPDR---VYLADYGLSYRY--CPNGNHKQYQEDPRKG 209

  Fly   234 LTGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI 298
            ..||..:.|::.|.|...|||.|:|.||:..:::|.|.|||:.           |:.|     |:
Mouse   210 HNGTIEFTSLDAHKGVAPSRRSDVEILGYCMLHWLFGKLPWEA-----------KLDD-----PV 258

  Fly   299 EV------LCDGHPE-------------EFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYT 344
            .|      |.|..||             |...||.||..|.:.:.|||..|:::.         .
Mouse   259 AVQTAKTNLLDELPESVLKWAPSGSSCSELVKYLMYVHNLAYDDKPDYQKLKKIL---------N 314

  Fly   345 DEGEFDWTGKTMSTPVGSLQTGHEVIISPNKDRHNVTAKTNAKGGVAAWPDVPKPGATLGNLTPA 409
            .:|          .|:|.|:...:|        .:|..:|.|:..|    |.||......|..||
Mouse   315 PDG----------VPLGPLEFSTKV--------QSVHVRTPAQQKV----DSPKATRKPANEFPA 357

  Fly   410 DRHGSVQVVSSTNGELNPDDPTAGHSNTPITQQPEVEVVDETKCCCFFKRKKKKSTRQKXLDGVQ 474
                              ..|...|..|...|                 |::::.::...|....
Mouse   358 ------------------KFPKKVHRETRARQ-----------------REEQEDSQPTMLQSRP 387

  Fly   475 CSPEREAVTLLRATSHSNSR-DSVLNNPSQDYIQ--------QATSQHTLRYPPSASMLTPTPTT 530
            .:||......:...|...|. .|:...||....|        ..|.:..:|.|.|......|||.
Mouse   388 AAPENSRTRKIHEYSDIFSEMQSLQQTPSYMSFQGSYCKPYLDCTRRDPIRKPRSLPRYRHTPTG 452

  Fly   531 N 531
            |
Mouse   453 N 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 93/329 (28%)
S_TKc 62..335 CDD:214567 92/309 (30%)
CK1gamma_C 354..428 CDD:289378 14/73 (19%)
Vrk2NP_081536.2 PKc_like 16..314 CDD:389743 94/323 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 334..353 6/22 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 362..395 7/49 (14%)
Interaction with MAP3K7. /evidence=ECO:0000250 392..503 14/62 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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