DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gish and Csnk1g2

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_006241063.1 Gene:Csnk1g2 / 65278 RGDID:621407 Length:441 Species:Rattus norvegicus


Alignment Length:454 Identity:292/454 - (64%)
Similarity:336/454 - (74%) Gaps:57/454 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GKSSSNNMYSTRQSVSTTTGVLMVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKA 99
            |.:.||  :..|.| .|::||||||||||||||||||||||||||||||.||:||||:||:||:|
  Rat    22 GTNRSN--HGVRNS-GTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRA 83

  Fly   100 PQLHLEYRFYK--------------LLGSHADNAP-------DGIPRIYHLGTCGGRYNAMVLEL 143
            |||||||||||              |||......|       :|:|::|:.|.| |:||||||||
  Rat    84 PQLHLEYRFYKQLSTTGEDTGRGAALLGGQGLRTPSIDVSLAEGVPQVYYFGPC-GKYNAMVLEL 147

  Fly   144 LGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYRDVKPENFLIGRTSTKREKIIHI 208
            ||.||||||::|.|.|:||||||||.||:.|:||||::.||||||||||||:||..:||:..|||
  Rat   148 LGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGSKRQHSIHI 212

  Fly   209 IDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLP 273
            |||||||||||.:|.:||||||||||||||||||||||:|:||||||||||||||||||||||||
  Rat   213 IDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP 277

  Fly   274 WQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLF 338
            |||||||||||||||||||||||||||||:..|||.||||||||||||||.||||:||:||.|||
  Rat   278 WQGLKADTLKERYQKIGDTKRATPIEVLCESFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 342

  Fly   339 DRKGYTDEGEFDWTGKTMSTPVGSLQTGHEVIISPNKDRHNVTAKTNAKGGVAAWPDVPKPGATL 403
            ||.||..:.|:||.||.:.||:|::.                             ||||....  
  Rat   343 DRSGYVFDYEYDWAGKPLPTPIGTVH-----------------------------PDVPSQPP-- 376

  Fly   404 GNLTPADRHGSVQVVSSTNGELNPDDPTAGHSNTPITQQPEVEVVDETKCCCFFKRKKKKSTRQ 467
             :...|..|...|.::|||||||.|||||||||.||....||||.|||||||||||:|:||.::
  Rat   377 -HRDKAQLHTKNQALNSTNGELNTDDPTAGHSNAPIAAPAEVEVADETKCCCFFKRRKRKSLQR 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 231/313 (74%)
S_TKc 62..335 CDD:214567 219/293 (75%)
CK1gamma_C 354..428 CDD:289378 18/73 (25%)
Csnk1g2XP_006241063.1 STKc_CK1_gamma 45..358 CDD:271028 231/313 (74%)
SPS1 45..>355 CDD:223589 229/310 (74%)
CK1gamma_C 358..400 CDD:289378 18/73 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351792
Domainoid 1 1.000 364 1.000 Domainoid score I909
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 613 1.000 Inparanoid score I873
OMA 1 1.010 - - QHG52120
OrthoDB 1 1.010 - - D281034at33208
OrthoFinder 1 1.000 - - FOG0001189
OrthoInspector 1 1.000 - - otm46286
orthoMCL 1 0.900 - - OOG6_101750
Panther 1 1.100 - - O PTHR11909
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X651
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.810

Return to query results.
Submit another query.