DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and Csnk1e

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_063120242.1 Gene:Csnk1e / 58822 RGDID:62045 Length:452 Species:Rattus norvegicus


Alignment Length:386 Identity:186/386 - (48%)
Similarity:259/386 - (67%) Gaps:55/386 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LMVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAP 120
            |.||..:|:|:|||.|:||::.||.|:.:.|.||||:|.:|:|.||||:|.:|||::....    
  Rat     3 LRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGV---- 63

  Fly   121 DGIPRIYHLGTCG--GRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHL 183
             |||.|   ..||  |.||.||:||||.|||||||.|:|||||||||::|.|::.||||:||::.
  Rat    64 -GIPSI---KWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF 124

  Fly   184 IYRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMG 248
            |:|||||:|||:|  ..|:..:::||||||||:|.|..|::||||||:|:|||||||.|||||:|
  Rat   125 IHRDVKPDNFLMG--LGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG 187

  Fly   249 REQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYL 313
            .|||||||||:||::.|||..||||||||||.|.:::|::|.:.|.:|||||||.|:|.||:|||
  Rat   188 IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYL 252

  Fly   314 RYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEF------------------DWTGKTMSTPV 360
            .:.|.|.|.:.|||.:||:||::||.|:|::.:..|                  ||||:.::   
  Rat   253 NFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFVSHRQAKAGLGDWTGQALT--- 314

  Fly   361 GSLQTGHEVIIS------PNKDRHNVTAKTNAKGGVAAWPDVPKP--GATLGNLTPADRHG 413
                  |:..::      |...|:.:.:.::..|       ||:|  .:.|| :..|.|||
  Rat   315 ------HKARVTWWGAGLPLNGRYELDSVSDVTG-------VPEPLVSSHLG-IDRACRHG 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 169/312 (54%)
CK1gamma_C 354..439 CDD:463640 13/68 (19%)
Csnk1eXP_063120242.1 None

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