DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gish and csnk1g2

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_012817061.1 Gene:csnk1g2 / 548442 XenbaseID:XB-GENE-481191 Length:412 Species:Xenopus tropicalis


Alignment Length:467 Identity:286/467 - (61%)
Similarity:341/467 - (73%) Gaps:59/467 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QRRERQASGGGPQTTTAGPSAGNVANATTALAGGKSSSNNMYSTRQSVSTTTGVLMVGPNFRVGK 66
            ||.|:    |.|:......|...|       ..|:||.|        .:..:|||||||||||||
 Frog     5 QREEK----GDPEEVARRMSKSGV-------GPGRSSRN--------TAANSGVLMVGPNFRVGK 50

  Fly    67 KIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAPDGIPRIYHLGT 131
            |||||||||||||||||.||:||||:||:||:||||||||||||.||:     .:|:|::|:.|.
 Frog    51 KIGCGNFGELRLGKNLYTNEYVAIKLEPVKSRAPQLHLEYRFYKQLGN-----TEGLPQVYYFGP 110

  Fly   132 CGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYRDVKPENFLIG 196
            | |:||||||||||.||||||::|.|.|:||||||||.||:.|:||||::.|:||||||||||:|
 Frog   111 C-GKYNAMVLELLGPSLEDLFDLCNRTFTLKTVLMIAVQLISRMEYVHAKSLVYRDVKPENFLLG 174

  Fly   197 RTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGREQSRRDDLEALG 261
            |..:||:|.||||||||||||.|.:|.:||||||||||||||||||||||:|:||||||||||||
 Frog   175 RPGSKRQKTIHIIDFGLAKEYWDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALG 239

  Fly   262 HMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLRYVRRLDFFETPD 326
            |||||||||:|||||||||||||||||||||||.||:|:||:..|||.||||||||:|||||.||
 Frog   240 HMFMYFLRGNLPWQGLKADTLKERYQKIGDTKRTTPVEILCNNFPEELATYLRYVRQLDFFEKPD 304

  Fly   327 YDFLRRLFQDLFDRKGYTDEGEFDWTGKTMSTPVGSLQTGHEVIISPNKDRHNVTAKTNAKGGVA 391
            |::|||||.||.||:|...:.|:||.|||:.:|:||:..|....:...|..:.            
 Frog   305 YEYLRRLFTDLLDRRGLIFDYEYDWVGKTLPSPIGSVPYGGLTQVQSKKQLYL------------ 357

  Fly   392 AWPDVPKPGATLGNLTPADRHGSVQVVSSTNGELNPDDPTAGHSNTPITQQPEVEVVDETKCCCF 456
                               :|   |.::||||:||.|||||||||.|||....|||.|:||||||
 Frog   358 -------------------KH---QGLNSTNGDLNMDDPTAGHSNAPITAHTGVEVADDTKCCCF 400

  Fly   457 FKRKKKKSTRQK 468
            |||:|:|||:||
 Frog   401 FKRQKRKSTQQK 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 221/292 (76%)
CK1gamma_C 354..439 CDD:463640 24/84 (29%)
csnk1g2XP_012817061.1 STKc_CK1_gamma 45..332 CDD:271028 221/292 (76%)
CK1gamma_C <344..383 CDD:463640 19/72 (26%)

Return to query results.
Submit another query.