DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and csnk1g1

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_031753667.1 Gene:csnk1g1 / 448124 XenbaseID:XB-GENE-488259 Length:460 Species:Xenopus tropicalis


Alignment Length:442 Identity:299/442 - (67%)
Similarity:347/442 - (78%) Gaps:25/442 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 YSTRQSVSTT-TGVLMVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEY 106
            :|:|.|.||| :||||||||||||||||||||||||||||||.||:||||:||:||:||||||||
 Frog    24 HSSRPSSSTTSSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEY 88

  Fly   107 RFYKLLGSHADNAPDGIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQL 171
            ||||.||    |..:|:|::::.|.| |:||||||||||.||||||::|.|.|:||||||||.||
 Frog    89 RFYKQLG----NTAEGLPQVFYFGPC-GKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQL 148

  Fly   172 LHRIEYVHSRHLIYRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTG 236
            :.|:|||||::|||||||||||||||...|:|.|||||||||||||||.:|.:||||||||||||
 Frog   149 ISRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHIIHIIDFGLAKEYIDPETKKHIPYREHKSLTG 213

  Fly   237 TARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVL 301
            ||||||||||:|:|||||||||||||||||||||||||||||||||||||||||||||.||:|||
 Frog   214 TARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPVEVL 278

  Fly   302 CDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWTGKTMSTPVGSLQT- 365
            |:..|||.||||||||||||||.||||:||.||.:||:||||:.:..:||.|:.:.||.||:.. 
 Frog   279 CENFPEEMATYLRYVRRLDFFEKPDYDYLRTLFSELFERKGYSFDYVYDWVGRPIPTPGGSVHVD 343

  Fly   366 -----------GHEVIISPNKDRHNVTAKTNAKGGVAAWPDVPKPGATLGNLTP---ADRH-GSV 415
                       ||....|..:...|.|...:.:|   ||.......|....|.|   :||| |||
 Frog   344 SGTSAITRESHGHRERPSQTQPLRNQTGVPDRRG---AWDLQVGRQAHPAYLVPHLASDRHGGSV 405

  Fly   416 QVVSSTNGELNPDDPTAGHSNTPITQQPEVEVVDETKCCCFFKRKKKKSTRQ 467
            ||:|||||:||.||.|.||||.|||.|.|||||:|.|||||||||:|..:::
 Frog   406 QVMSSTNGQLNADDQTGGHSNAPITAQAEVEVVEEAKCCCFFKRKRKNHSQR 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 228/292 (78%)
S_TKc 62..335 CDD:214567 218/272 (80%)
CK1gamma_C 354..428 CDD:289378 30/89 (34%)
csnk1g1XP_031753667.1 STKc_CK1_gamma 43..331 CDD:271028 228/292 (78%)
CK1gamma_C 331..429 CDD:403712 37/100 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 360 1.000 Domainoid score I955
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 574 1.000 Inparanoid score I1032
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D281034at33208
OrthoFinder 1 1.000 - - FOG0001189
OrthoInspector 1 1.000 - - oto105232
Panther 1 1.100 - - O PTHR11909
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X651
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.160

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