DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and csnk1a1

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_012814233.1 Gene:csnk1a1 / 407897 XenbaseID:XB-GENE-478121 Length:365 Species:Xenopus tropicalis


Alignment Length:383 Identity:171/383 - (44%)
Similarity:231/383 - (60%) Gaps:63/383 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SVSTTTGVLMVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLL 112
            |.|.:....:||..:::.:|||.|:||::.|..|:.|.|.||:|:|..|::.|||..|.:.||:|
 Frog     3 SSSGSKAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKIL 67

  Fly   113 GSHADNAPDGIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEY 177
            ....     |||.|...|. ...||.:|::|||.|||||||.|:|:|::|||||:|.|::.||||
 Frog    68 QGGV-----GIPHIRWYGQ-EKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEY 126

  Fly   178 VHSRHLIYRDVKPENFLIG--------------------RTSTKRE------KIIHIIDFGLAKE 216
            ||:::.|:||:||:|||:|                    ..||.::      ..:.:|||||||:
 Frog   127 VHTKNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFGLAKK 191

  Fly   217 YIDLDTNRHIPYREHKSLTGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGLKADT 281
            |.|..|.:||||||.|:|||||||.|||.|:|.|||||||:|:||::.|||.|.|||||||||.|
 Frog   192 YRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAAT 256

  Fly   282 LKERYQKIGDTKRATPIEVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDE 346
            .|::|:||.:.|.:||:||||.|.|.|||.||.|.|.|.|.|.|||.:||:||:.||....:..:
 Frog   257 KKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYD 321

  Fly   347 GEFDWT----------------GKTMSTPVGSLQTGHEVIISPNKDRHNVTAKTNAKG 388
            ..||||                |:...||.|. ||          |:    :|:|.||
 Frog   322 YTFDWTMLKQKAAQQAASSSGQGQQAQTPTGK-QT----------DK----SKSNMKG 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 156/334 (47%)
CK1gamma_C 354..439 CDD:463640 10/35 (29%)
csnk1a1XP_012814233.1 STKc_CK1_alpha 16..309 CDD:271030 148/298 (50%)

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