DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and CG8878

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001260913.1 Gene:CG8878 / 36302 FlyBaseID:FBgn0027504 Length:1004 Species:Drosophila melanogaster


Alignment Length:885 Identity:144/885 - (16%)
Similarity:239/885 - (27%) Gaps:424/885 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QRRERQASGGGPQT--------------TTAGPSAGNVANATTAL------------AGGKSSSN 40
            ::|:| .|||....              ::||.:||..|:..|.|            |...|..|
  Fly    28 EKRQR-LSGGSSSANGFEFHENDDEESCSSAGSAAGTEADPPTLLHTPQARSLLLTGASIASDHN 91

  Fly    41 N---------MYSTRQSVSTTTGVL--MVGPNFRVGKKIGCGNFGELRLGKN------LYNNEHV 88
            |         :|:.|.||...| :|  ::...:|:|:.||.|||||:.|..:      .......
  Fly    92 NSSVMESPRPVYTLRPSVVNGT-ILRDVLSKAWRLGRPIGKGNFGEIFLASDDTVCPASSETAKY 155

  Fly    89 AIKMEPMKS-----------------------------KAPQLHLEYRFYKLLGSHADNAPDGIP 124
            .:|:||..:                             .|||.|:..|          ..|.|||
  Fly   156 VVKIEPHSNGPLFVEIHCLINTSRNNDLSDAAEDAASLPAPQTHVLSR----------GPPSGIP 210

  Fly   125 RIYHLGT--CGG-RYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYR 186
            .....||  .|. ||..:||......|..|  |...:...|::|::|..:::.:|.:|.:...:.
  Fly   211 SFIASGTHYFGDVRYRFLVLPRFDRDLHSL--IKNSRVQQKSLLVLAVHIINVLENLHDKGYCHN 273

  Fly   187 DVKPENFLI-------------------------------------------------------- 195
            |:|.:|.::                                                        
  Fly   274 DIKAQNLMVSKCKYLRRQVVPKGNGYEDHYEEKQQTTDSGNSSEQETNDDDYFLKSEKFALKKIV 338

  Fly   196 ---------------GRTS---------------------------------------------- 199
                           |.||                                              
  Fly   339 DIKQDEDEDDEDFDDGATSNSNNSNSLDVFHTPVNKKRSARNAIQFSGSNPVRACRREKRNSMYE 403

  Fly   200 ----------TKR---------------------------------------------------- 202
                      |||                                                    
  Fly   404 EMVKSHYLRPTKRISYREEFNEDGYPKETAENSDESPESSDNESDEFIPPSSRRSVIKRGRSAQI 468

  Fly   203 ---------------EKI----------------------------------IHIIDFGLAKEYI 218
                           ||:                                  :.:||||||.::.
  Fly   469 ATPKKTPVSTRASRQEKVKKEPNGDQKLRSRGSKHLDNNPTEYKFLPTEEEHVFLIDFGLASKFQ 533

  Fly   219 DLDTNRHIPYREHKSLTGTARYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK 283
            |...:|.....:.::..||..:.|.:.|:| ..|||.|||.||:..:|:..|.|||:.:.....:
  Fly   534 DRGVHRPFIMDQRRAHDGTLEFTSRDAHLG-AHSRRSDLECLGYNLLYWSEGYLPWKDVAQQQQQ 597

  Fly   284 ERYQKIGDTKRATPIEVLCDGH----PEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYT 344
            |:..:..:.......|:|...:    |:....:|..:.:|.:.|.|:|:..|::|:..:.|.||.
  Fly   598 EKVHRAKELFMTDVPEMLRQFYGKQVPKYLGEFLLQIGQLAYQERPNYERYRKIFKREYQRLGYD 662

  Fly   345 D---------------------EGE----FDWTGK---------TMSTPVGSLQTGHEVI--ISP 373
            .                     :|.    |:...|         |:|||...    |.:.  :||
  Fly   663 PCQMRLSSEEILRTCVSTKDVVDGSKCDIFELNNKAAVNVMRNSTLSTPFQE----HSLTNRVSP 723

  Fly   374 NKDRHNVTAKTNAKGGVAAWPDV-----------------------------------PKPGATL 403
            ...|.....||..|  ..:|.:|                                   .||...:
  Fly   724 KNLRSKSNKKTTKK--KFSWAEVLSQDPDQIARERAVKEFEREETICPLESRLPRRYEGKPTYAI 786

  Fly   404 GNLTPADRHGSVQV---VSSTNGELNPDDPTAGHSNTPITQQPEVEVVDETKCCCFFKRKKKKST 465
            .::....|...:.|   :.....:.:.||.........|.|:.:.|..|..         :.:..
  Fly   787 LDMEQRRREKGLVVQEHIEEEEEDADEDDEEENQEAMDIDQEEDGEAADSA---------EGEDE 842

  Fly   466 RQKXLDGVQCS-------------PEREAVTLLRATSHSN 492
            ..:.::|..||             ..|:..|..:|..|.|
  Fly   843 SDRSMEGSDCSDHSQKRARGRPKGTSRKQTTSRQAQPHQN 882

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 90/587 (15%)
S_TKc 62..335 CDD:214567 84/542 (15%)
CK1gamma_C 354..428 CDD:289378 18/122 (15%)
CG8878NP_001260913.1 PKc_like 112..>286 CDD:304357 42/186 (23%)
SPS1 123..>284 CDD:223589 40/172 (23%)
SPS1 <491..756 CDD:223589 56/271 (21%)
PKc_like <517..652 CDD:304357 36/135 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11909
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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