DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and CkIalpha

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_511140.1 Gene:CkIalpha / 32221 FlyBaseID:FBgn0015024 Length:337 Species:Drosophila melanogaster


Alignment Length:339 Identity:161/339 - (47%)
Similarity:222/339 - (65%) Gaps:19/339 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LMVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAP 120
            ::||..:||.:|||.|:||::.||.::.:.|.||||||...::.|||..|.:.|::|....    
  Fly    14 IIVGGKYRVIRKIGSGSFGDIYLGMSIQSGEEVAIKMESAHARHPQLLYEAKLYRILSGGV---- 74

  Fly   121 DGIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIY 185
             |.|||.|.|. ...:|.:|::|||.|||||||.|.|.|::|||||:..|::.|:||:|.:..|:
  Fly    75 -GFPRIRHHGK-EKNFNTLVMDLLGPSLEDLFNFCTRHFTIKTVLMLVDQMIGRLEYIHLKCFIH 137

  Fly   186 RDVKPENFL--IGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMG 248
            ||:||:|||  |||...|    :.:|||||||::.|..|..||.|||.|:|||||||.|||.|:|
  Fly   138 RDIKPDNFLMGIGRHCNK----LFLIDFGLAKKFRDPHTRHHIVYREDKNLTGTARYASINAHLG 198

  Fly   249 REQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYL 313
            .|||||||:|:||::.|||.||.|||||:||:|.:::|:||.:.|.:|||||||.|.|.||:.||
  Fly   199 IEQSRRDDMESLGYVMMYFNRGVLPWQGMKANTKQQKYEKISEKKMSTPIEVLCKGSPAEFSMYL 263

  Fly   314 RYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWTGKTMSTPVGSLQTGHEVIISP-NKDR 377
            .|.|.|.|.|.|||.:||:||:.||....:..:..:|||.....|..|  |....:::.. :||:
  Fly   264 NYCRSLRFEEQPDYMYLRQLFRILFRTLNHQYDYIYDWTMLKQKTHQG--QPNPAILLEQLDKDK 326

  Fly   378 HNVTAKTNAKGGVA 391
            .    |.|.|..:|
  Fly   327 E----KQNGKPLIA 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 150/294 (51%)
CK1gamma_C 354..439 CDD:463640 9/39 (23%)
CkIalphaNP_511140.1 Protein Kinases, catalytic domain 19..284 CDD:473864 143/274 (52%)

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