DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gish and cki2

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_595380.1 Gene:cki2 / 2541341 PomBaseID:SPBP35G2.05c Length:435 Species:Schizosaccharomyces pombe


Alignment Length:295 Identity:169/295 - (57%)
Similarity:222/295 - (75%) Gaps:6/295 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 MVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAPD 121
            :||.::|||:|||.|:||.:..|.||.||:.:|||.||.||:||||..|||.||||..:|     
pombe     7 VVGVHYRVGRKIGEGSFGVIFDGMNLLNNQLIAIKFEPKKSEAPQLRDEYRTYKLLVGNA----- 66

  Fly   122 GIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYR 186
            |||.:|:.|. .|.:|.:|::|||.||||||..|.|:||:|||.|.|||:|.|::.:|.::|:||
pombe    67 GIPNVYYFGQ-EGLHNILVIDLLGPSLEDLFEWCGRRFSVKTVAMTAKQMLSRVQTIHEKNLVYR 130

  Fly   187 DVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGREQ 251
            |:||:||||||.|::...:::::|||:||.|.|..|.:||||.|.|||:|||||||||||:||||
pombe   131 DIKPDNFLIGRPSSRNANMVYMVDFGMAKYYRDPKTKQHIPYSERKSLSGTARYMSINTHLGREQ 195

  Fly   252 SRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLRYV 316
            |||||||:|||:||||||||||||||||...|.:|:||.:.|::|.|..||.|.|.||:.|:.||
pombe   196 SRRDDLESLGHVFMYFLRGSLPWQGLKAANNKHKYEKISEKKQSTSISELCAGFPNEFSKYMTYV 260

  Fly   317 RRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDW 351
            |.|:|.|.|||.||:.||.|:....|.|::|.:||
pombe   261 RSLEFDEEPDYAFLQELFDDVLRANGDTNDGVYDW 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 167/291 (57%)
S_TKc 62..335 CDD:214567 160/272 (59%)
CK1gamma_C 354..428 CDD:289378
cki2NP_595380.1 SPS1 11..378 CDD:223589 167/291 (57%)
STKc_CK1_fungal 11..287 CDD:271029 162/281 (58%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 274 1.000 Domainoid score I318
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 357 1.000 Inparanoid score I469
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001189
OrthoInspector 1 1.000 - - otm47397
orthoMCL 1 0.900 - - OOG6_101750
Panther 1 1.100 - - O PTHR11909
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R203
SonicParanoid 1 1.000 - - X651
TreeFam 00.000 Not matched by this tool.
1110.890

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