DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gish and cki1

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001342877.1 Gene:cki1 / 2539610 PomBaseID:SPBC1347.06c Length:446 Species:Schizosaccharomyces pombe


Alignment Length:479 Identity:208/479 - (43%)
Similarity:285/479 - (59%) Gaps:85/479 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 MVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAPD 121
            :||.:::||::||.|:||.:..|.||.||:.||||.||.:|.||||..|||.||||....     
pombe     7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCT----- 66

  Fly   122 GIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYR 186
            |||.:|:.|. .|.:|.:|::|||.|||||.::|.||||:|||.|.|||:|.|::.:|.:.|:||
pombe    67 GIPNVYYFGQ-EGLHNILVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYR 130

  Fly   187 DVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGREQ 251
            |:||:||||||.::|...:|:::|||:.|.|.|..|.:||||||.|:|:|||||||||||:||||
pombe   131 DIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQ 195

  Fly   252 SRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLRYV 316
            |||||||||||:||||||||||||||||.|.|::|::||:.|::||:..||.|.||||..|:.|.
pombe   196 SRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYA 260

  Fly   317 RRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDW----TGKTMSTPVGSLQTGHEVIISPNKDR 377
            |.|.|..|||||:|:.||..:.:|...|::..|||    .||           |.:.:.|.|.:.
pombe   261 RNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNLLNNGK-----------GWQSLKSRNAET 314

  Fly   378 HNVTAKTNAKGGVAAWPDVPKPGATLGNLTPA-DRHGSVQ-VVS-----------------STNG 423
            .|   :.::|      |..||    |.:.:|| ..|.|.| |||                 |.:.
pombe   315 EN---QRSSK------PPAPK----LESKSPALQNHASTQNVVSKRSDYEKPFAEPHLNSASDSA 366

  Fly   424 ELN----PDDPTAGHSNTPI-------TQQP-EVEVVDETKCCCFFKRKKKKSTRQKXLDGVQCS 476
            |.|    |:.||...:.|.:       |.|| .|:|.|.:         :::.||:: .:..:  
pombe   367 EPNQNSLPNPPTETKATTTVPDRSGLATNQPAPVDVHDSS---------EERVTREQVQNATK-- 420

  Fly   477 PEREA--------VTLLRATSHSN 492
             |.||        .::|...|.||
pombe   421 -ETEAPKKKKSFWASILSCCSGSN 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 165/296 (56%)
S_TKc 62..335 CDD:214567 159/272 (58%)
CK1gamma_C 354..428 CDD:289378 21/96 (22%)
cki1NP_001342877.1 STKc_CK1_fungal 11..287 CDD:271029 161/281 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 274 1.000 Domainoid score I318
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 357 1.000 Inparanoid score I469
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001189
OrthoInspector 1 1.000 - - otm47397
orthoMCL 1 0.900 - - OOG6_101750
Panther 1 1.100 - - LDO PTHR11909
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X651
TreeFam 00.000 Not matched by this tool.
109.860

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