DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and Y47G6A.13

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_491162.1 Gene:Y47G6A.13 / 189993 WormBaseID:WBGene00021639 Length:468 Species:Caenorhabditis elegans


Alignment Length:308 Identity:77/308 - (25%)
Similarity:131/308 - (42%) Gaps:13/308 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 YNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYRDVKPENFLIGRTST 200
            |..||..|.|..|..|.....|.|:..|.:.:|...|:.::.:|....::|||||.|.:......
 Worm    95 YRYMVTTLCGKDLMALRMKIQRGFNDATAMRVAVFTLYGLKQLHEAGYVHRDVKPGNIMTAANKG 159

  Fly   201 KREKIIHIIDFGLAKEYI---DLDTNRHIPYREHKSLTGTARYMSINTHMGREQSRRDDLEALGH 262
            :..:::.:||||:|:.::   |....:..|.|....|.||.||.|:|.|..:||.|.|||.|:.:
 Worm   160 RDARVMLLIDFGMARTFVMAGDDGKKKLRPMRRRIPLRGTIRYCSMNVHERKEQGRCDDLVAMIY 224

  Fly   263 MFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEFATYLRYVRRLDFFETPDY 327
            ..:|...| |||..||.:      ::|...|::|....|.:..|:|..:...|:|.|.:.:.|:|
 Worm   225 SIVYLTLG-LPWSNLKDE------KEIMSMKKSTKDLALFEDLPDELKSIFEYLRTLSYADRPNY 282

  Fly   328 DFLRRLFQDLFDRKGYTDEGEFDWTGKTMSTPVGSLQTGHEVIISPNKDRHNVTAKTNAKGGVAA 392
            :.:..|......|........::|....|.....:.:...|......|::.|   |.|.....:.
 Worm   283 EKIYNLLMAAITRLKINFLDPYEWEDDEMERMAKAEKEEKEKEEKEKKEKEN---KENELSADSM 344

  Fly   393 WPDVPKPGATLGNLTPADRHGSVQVVSSTNGELNPDDPTAGHSNTPIT 440
            ...:|...|...:....:.....:|..:::||...|.......|..|:
 Worm   345 KTAIPAKSAKAESEVAGEVDEQKKVKDNSSGEQQQDTLNVDKGNKLIS 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 63/220 (29%)
CK1gamma_C 354..439 CDD:463640 13/84 (15%)
Y47G6A.13NP_491162.1 Protein Kinases, catalytic domain 24..289 CDD:473864 60/200 (30%)

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