DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and W09C3.1

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_491433.2 Gene:W09C3.1 / 189309 WormBaseID:WBGene00021109 Length:439 Species:Caenorhabditis elegans


Alignment Length:441 Identity:99/441 - (22%)
Similarity:170/441 - (38%) Gaps:76/441 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 KKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAPQLHLEYRFYKLLGSHADNA----PDGIPRI 126
            :::|.|.||.:....|....:..|:|:|.|.:....|..| |...:...|...|    .|||.:.
 Worm    37 RELGRGAFGTVYHVSNKSTKQEAALKIEKMTAGDNLLKFE-REIMVAMQHEPTAIHIYDDGIYKD 100

  Fly   127 YHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYRDVKPE 191
            |       ||  :|:.|.|..|:.:..:....|:..|::.:..:.|..|:.:|....|:||:||.
 Worm   101 Y-------RY--IVMTLCGPDLQKIAELMNNNFNQDTIIRVCIRTLLAIKTMHEYTYIHRDLKPC 156

  Fly   192 NFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKS---LTGTARYMSINTHMGREQSR 253
            ||.:........  :::.|:|:|::|...|:......|..::   ..||.||.|:|.|..:|.||
 Worm   157 NFAVDFNPNSLH--VYLFDYGMARKYATKDSGNKWQLRRPRNPAQFRGTVRYCSLNMHKRKELSR 219

  Fly   254 RDDLEALGHMFMYFLRGSLPW---------QGLKADTLKERYQKIGDTKRATPIEVLCDGHPEEF 309
            .|||.:...|.|. :...|||         :.||.|.|.|...|              |.....|
 Worm   220 VDDLWSWFFMLME-MYAPLPWTSSNIPERIEALKEDHLNEYLSK--------------DSFLSSF 269

  Fly   310 ATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTD-----EGEFDWTGKTMSTPVGSL-QTGHE 368
            ...:.|:..:.:.:.|||   .:::..|:.:  .|:     .|...:....::..|..| :|...
 Worm   270 LPLVEYLNSVQYADRPDY---MKIYDILYAK--LTEINGKLSGPMKYDVARINALVAELGETARP 329

  Fly   369 VIISPNKDRHNVTAKTNAKGGVAAWP----------------DVPKPGATLGNLTPADRHGSVQV 417
            ..:|...|...:.....|..|.|..|                |||...|.........:..:.:|
 Worm   330 KELSRMDDESTIQKYLLASFGRAGVPGGNNLIMAELVDFFAKDVPLKKAREEKTDDNKKQKNAKV 394

  Fly   418 VSSTNGELNPDDPTAGHSNTPITQQPEVEVVDETKCCCFFKRKKKKSTRQK 468
            .:...|:  |..|.:|.:|:...:..:.::..:...    .:|.|.|.|.|
 Worm   395 KNKMLGK--PKQPGSGGANSGDAKTAQSKLGSKMST----HKKAKVSKRNK 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 75/308 (24%)
S_TKc 62..335 CDD:214567 72/284 (25%)
CK1gamma_C 354..428 CDD:289378 15/90 (17%)
W09C3.1NP_491433.2 PKc_like 33..294 CDD:389743 72/286 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160812
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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