DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gish and W03G9.5

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_491490.1 Gene:W03G9.5 / 189171 WormBaseID:WBGene00021016 Length:488 Species:Caenorhabditis elegans


Alignment Length:509 Identity:125/509 - (24%)
Similarity:209/509 - (41%) Gaps:146/509 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 GCGNFGELRLGKNLYNNEHVAIKME-PMKSKAPQLHLEYRFYKLLG-------------SHADNA 119
            |||...|:.:.|  ......|.|.| .:..:.|.|.:|::....|.             ..:|| 
 Worm    28 GCGVIYEVAMVK--CPGRRFACKAETTVFDEDPTLPMEHKIISKLNEKNSIHCVELIDKGQSDN- 89

  Fly   120 PDGIPRIYHLGTCGGRYNAMVLELLGLSLEDL-FNICARKFSLKTVLMIAKQLLHRIEYVHSRHL 183
                            |..:|:.|||.||:.: ..:...|||..:.|::..|.|..|:.:|....
 Worm    90 ----------------YQFIVMTLLGPSLDAIRATLPTNKFSTFSTLVMGIQALDSIKEIHDIGF 138

  Fly   184 IYRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLD----------TNRHIPYREHKSLTGTA 238
            ::|||||.||.||...|.:::::|::|||::::|:..|          ..|.:|:|      ||.
 Worm   139 VHRDVKPANFAIGALGTPKQRLVHVLDFGISRQYLVKDGENGGLRIRKPRRIVPFR------GTL 197

  Fly   239 RYMSINTHMGREQSRRDDLEALGHMFMYFLRGSLPWQGL----KADTLKERYQKIGDTKRATPIE 299
            ||.|:.....:||.|.|||.:|.:|.:.|::|||||.|:    |...:||            .:.
 Worm   198 RYCSVAAQERKEQGRHDDLWSLFYMIVEFVKGSLPWTGIMEEEKVIVMKE------------DVT 250

  Fly   300 VLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDW----------TGK 354
            .|.:|...|.|.:.:::..|.:...|||..||.|..::|.|:.:..:.:.||          ..|
 Worm   251 ELFNGLESECAMFAQHLSVLRYQTNPDYALLRDLLMNIFVRRNFNAQMKVDWEKGGRYESHFEKK 315

  Fly   355 TMSTPVGSLQTGHEVIIS-----PNKDRHNVT-------AKTNAKGGVAAWPDVPKPGATLGNLT 407
            |.:.||...:...||.:|     |..:| |:|       .||..:.|:              |..
 Worm   316 TSTLPVVIEKDMTEVDLSKLLNVPQNER-NITMEEIIAAGKTTEEEGL--------------NTA 365

  Fly   408 PADRHGSVQVVSSTNG-----ELNPDDPTAGHSNTP-------ITQQP---EVEVVDETKCCCFF 457
            ..|     .:|...||     |..|..|:| .|.|.       |.:.|   ::|.:::.     :
 Worm   366 QDD-----TIVEDENGFLGKQEAKPATPSA-RSETSKKVKRRYIARTPSAHKIEQIEKN-----W 419

  Fly   458 KRKKKKSTRQKXLDGVQCS---------PE--------REAVTLLRATSHSNSR 494
            |:|::::.::| |...:.:         ||        .|:..|..|.|..::|
 Worm   420 KKKEEEANKEKLLKNARAARRAKEDFIVPEDNTVQKRKLESTQLSSAVSTKSTR 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 86/323 (27%)
S_TKc 62..335 CDD:214567 82/294 (28%)
CK1gamma_C 354..428 CDD:289378 20/90 (22%)
W03G9.5NP_491490.1 PKc_like 22..285 CDD:389743 81/293 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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