DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and T19D12.5

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_495349.1 Gene:T19D12.5 / 188608 WormBaseID:WBGene00020580 Length:361 Species:Caenorhabditis elegans


Alignment Length:302 Identity:86/302 - (28%)
Similarity:145/302 - (48%) Gaps:36/302 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 IGCGNFGELRLGKNLYNNEHVAIKMEPMKSK---APQLHLE-YRFYKLLGS-HADNAPDGIPRIY 127
            ||.|.:||:.|..::...|.||||:||.|.:   |.::.|| :...|:.|. |       :|.||
 Worm    68 IGKGGYGEIYLALDVVRGEEVAIKVEPKKRRGKLAKRMILEQHVLAKMQGKPH-------VPMIY 125

  Fly   128 HLGTCGGRYNAMVLELLGLSLEDLFNICA-RKFSLKTVLMIAKQLLHRIEYVHSRHLIYRDVKPE 191
            ..|. ..:||.:::::|.:::.|:..... :|.|..:|..|..|::..::.:|....::|||||.
 Worm   126 GSGH-AEKYNFIIMQILSINVGDIKKSSPNKKLSQCSVGRIIHQVIAALQDLHETGYVHRDVKPA 189

  Fly   192 NFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGREQSRRDD 256
            |...|.....|..:| ::||||.:.| .:::......|......||.||:||..|...|||..||
 Worm   190 NMCFGIFPHSRHTLI-LLDFGLVRRY-KMESGEWREPRLRAGFRGTTRYVSIRVHRRCEQSPYDD 252

  Fly   257 LEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCDG--HPEEF-------ATY 312
            |.::.:.....|.|.|||:.|      |:.:::...|     ||:.:.  :||.|       ..:
 Worm   253 LVSVMYTAYELLAGELPWKHL------EKSEEVVQLK-----EVMTENGINPELFQGDKSVLIDF 306

  Fly   313 LRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFDWTGK 354
            .:.|..:|..:.|.|:.|....:.|:..|..||..|::.:.|
 Worm   307 FKQVSEMDPMKEPCYEKLIECIKVLYAPKVLTDPYEWEESSK 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 85/300 (28%)
S_TKc 62..335 CDD:214567 80/281 (28%)
CK1gamma_C 354..428 CDD:289378 1/1 (100%)
T19D12.5NP_495349.1 PKc_like 61..329 CDD:389743 80/281 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160822
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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