DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and T15B12.2

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001367879.1 Gene:T15B12.2 / 188528 WormBaseID:WBGene00020531 Length:446 Species:Caenorhabditis elegans


Alignment Length:422 Identity:100/422 - (23%)
Similarity:171/422 - (40%) Gaps:85/422 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QRRERQASGGGPQTTTAGPSAGNVANATTALAGGKSS------SNNMYSTRQSVSTTTGVLMVGP 60
            ||.|::|.....||.:..|             |.|..      |||   |:...:.|..|..|..
 Worm     7 QRTEKEAVTKDGQTGSKKP-------------GYKKKPVKKLLSNN---TKVKTNKTKRVWCVQA 55

  Fly    61 NFRVGKKIGCGNFGELRLGKNLYNNEH----VAIKMEPMKSKAPQLHLEYRFYKLLGSHADNAPD 121
            :      ||.|.||::   ..:|:..:    .|:|.|...::..:|.:|....|.:.::....  
 Worm    56 H------IGSGGFGDV---YRVYDEPNPKMEYAMKTEVHGAQQRRLSIEKSILKEIDTYTTTH-- 109

  Fly   122 GIPRIYHLGTC----GGR---YNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVH 179
              .:..|.  |    .|:   |:.:|:.|:|.|||.:..:..|:::...|:.:|.|:|..:|.:|
 Worm   110 --KKSRHF--CELIDSGQTKDYSWIVMTLIGPSLESVRRMLKRQYTKSCVINMALQILDAVEVMH 170

  Fly   180 SRHLIYRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHI-PYREHKSLTGTARYMSI 243
            ....|:||:||.|...| |..:.:.:::::|||:::..........: ..||.....||.::.|.
 Worm   171 EVGFIHRDLKPANICTG-TPPQDDHVLYVLDFGISRRVFKSSKCHELRNKRERVPFFGTRKFSSR 234

  Fly   244 NTHMGREQSRRDDLEALGHMFMYFL-------RGSLPWQGLKADTLKERYQKIGDTKRA---TPI 298
            ..|..::|.|:||:|.    ::|.:       || |.|....||.     .||.:.|.|   .|.
 Worm   235 ACHQEKDQGRKDDMET----YLYTILDLFHNERG-LSWSKDLADV-----NKIIEKKHALFENPT 289

  Fly   299 EVLCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGE--FDWTG-------- 353
            :.|....|......:.|:|.|.|.:..||..:....:....:...:|..:  .||||        
 Worm   290 KELDKIIPSGIDNIIVYLRGLKFEDPVDYRQIENELRTAGKKMAPSDSSDETMDWTGKLEQLLKE 354

  Fly   354 ----KTMSTPVGSLQTGHEVIISPNKDRHNVT 381
                |.:.||.|.....:| .:...:||...|
 Worm   355 ANKNKAVGTPKGEETLLYE-RLKAKRDRDMTT 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 76/328 (23%)
S_TKc 62..335 CDD:214567 71/294 (24%)
CK1gamma_C 354..428 CDD:289378 8/28 (29%)
T15B12.2NP_001367879.1 STKc_TTBK 51..353 CDD:270919 77/327 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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