DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and T11F8.4

DIOPT Version :9

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_500816.3 Gene:T11F8.4 / 188418 WormBaseID:WBGene00020435 Length:535 Species:Caenorhabditis elegans


Alignment Length:461 Identity:114/461 - (24%)
Similarity:183/461 - (39%) Gaps:130/461 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 KKIGCGNFGELRLGKNLYNNEHVAIKMEP--------MKSKAPQLHL---EYRFYKLLGSHADNA 119
            |.:|.|.||::....|:.:....|:|||.        :|.:...|..   :....:||.|..:  
 Worm    26 KVLGSGAFGKVVHVVNIVDGSDGAMKMEKYQEGNESVLKGEVEVLRALSGQKNAIQLLDSGLE-- 88

  Fly   120 PDGIPRIYHLGTCGGRYNAMVLELLGLSLEDLFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLI 184
            ||              |..:|:.|.|:.|:.::|:...:||..|||.:|.:.||.::.:|....|
 Worm    89 PD--------------YRFIVMTLCGMDLQKVYNLLKGQFSDSTVLRVAIRSLHAVKALHEACYI 139

  Fly   185 YRDVKPENFLIGRTSTKREKIIHIIDFGLAKEYIDLDTNRHIPYREHKS--LTGTARYMSINTHM 247
            :||:||.|..:  ...:...:|.:||||:.::|..:|...::..|...:  ..||.||.|...|:
 Worm   140 HRDLKPCNVTL--DYNEYSPLIFLIDFGMGRKYAKIDEGEYVIRRPRDACRFRGTIRYCSPRMHL 202

  Fly   248 GREQSRRDDLEALGHMFMYFLRGSLPWQGL----KADTLKERYQKIGDTKRATPIEVLCDGHPEE 308
            .|||.|.|||.|..:|.:. |:..|||..:    :.:.||  .:|......:.|:       .:.
 Worm   203 RREQGRVDDLYAWLYMIVE-LKVELPWSEVVHPDRIEFLK--LEKFDAAMASNPL-------TKS 257

  Fly   309 FATYLRYVRRLDFFETPD----YDFLRRLFQDLFDRKGYTDEGEFDWTGK-------------TM 356
            |...:.:::.|.:.:.|:    |:.|.::..||  ...:||..::|...|             |.
 Worm   258 FEPIMDHLKTLRYPDRPNYLMIYELLAKMMSDL--NAKHTDPMDYDVFRKKNEVTDAIKKKYQTR 320

  Fly   357 S-TPVGSLQTGHEVIISPNKDRHNVTAKTNAKGGVAAWPDVP-------KPGATLGNLTPADRHG 413
            | .|..:|:....:.:.....|    .||:         |||       ||...|.       .|
 Worm   321 SRLPEKALEESATIAVLEEAFR----PKTS---------DVPGGDQYVVKPLLKLS-------WG 365

  Fly   414 SVQVVSSTNGELNPDDPTAGHSNTPITQQPEVEVVDETKCCCFFKRK----------------KK 462
            ||...|        |.|||          .|||.|:|..    .|:|                ||
 Worm   366 SVVAAS--------DFPTA----------DEVETVEEKD----LKKKQDAKNQESDKRKNSDRKK 408

  Fly   463 KSTRQK 468
            ||.|:|
 Worm   409 KSERKK 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 79/308 (26%)
S_TKc 62..335 CDD:214567 74/289 (26%)
CK1gamma_C 354..428 CDD:289378 18/94 (19%)
T11F8.4NP_500816.3 PKc_like 21..283 CDD:389743 73/284 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1164
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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