DRSC/TRiP Functional Genomics Resources

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Protein Alignment gish and F59E12.3

DIOPT Version :10

Sequence 1:NP_001262624.1 Gene:gish / 49701 FlyBaseID:FBgn0250823 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_495099.2 Gene:F59E12.3 / 186628 WormBaseID:WBGene00019119 Length:141 Species:Caenorhabditis elegans


Alignment Length:158 Identity:38/158 - (24%)
Similarity:58/158 - (36%) Gaps:39/158 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NATTALAGGKSSSNNMYSTRQSVSTTTGVLMVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIK 91
            :.|..||||...:.       |:||.|          :.:||..|:||.:...........:.:|
 Worm     4 STTPFLAGGTELTT-------SISTYT----------INEKIAEGSFGAIFKVTEKSTGTRLVLK 51

  Fly    92 MEPMKSKAPQLHLE-------YRFYKLLGSHADNAPDGIPRIYHLGTCGGRYNAMVLELLGLSLE 149
            .|...|.:..|.:|       :|.|             :|.:...|...|. ..:::.|.|.|||
 Worm    52 AELPGSPSNDLRIELVTMLRVFRSY-------------VPEVTDKGVFNGT-KFLIMPLFGKSLE 102

  Fly   150 DLFN-ICARKFSLKTVLMIAKQLLHRIE 176
            |:.. :...|.||.|.:....|.|..||
 Worm   103 DIIGALPGNKCSLSTAIGSLYQCLEAIE 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gishNP_001262624.1 STKc_CK1_gamma 61..354 CDD:271028 29/124 (23%)
CK1gamma_C 354..439 CDD:463640
F59E12.3NP_495099.2 Protein Kinases, catalytic domain 21..>130 CDD:473864 29/132 (22%)
Blue background indicates that the domain is not in the aligned region.

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